Clone BS26110 Report

Search the DGRC for BS26110

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:261
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptmRpS34-RA
Protein status:BS26110.pep: full length peptide match
Sequenced Size:599

Clone Sequence Records

BS26110.complete Sequence

599 bp assembled on 2011-08-24

GenBank Submission: KX802715

> BS26110.complete
GAAGTTATCAGTCGACATGGCCCAAAAAGTGATCAAGTACATCGGTCGCA
CCACAGACTTTCGCGGCAACACGCTGTGGGAGCTGGTCTCAAACCTGCCC
AACTGGGGTGTGGGCCGTCTGCTAATACGTAACATGTTCCAGCGATATCC
GGAGCCCTGCTACATGCGGATTCTGAAGGTGCAGTCCGTGGACGAGCAGC
CCGGCGAGATCCGCAAGGTGCGGGTCACTGTGGAGAAAACGTGGCGCGGC
GTAACGCAGCCAAAGCCTGTGGAAATCTACAGCACCAGCTATAAGGCGGA
CTACGAACTGGTGCCGCAGGATCAGGAAGCAAAGTATCTGAACAACAAGA
AGAAGGTTGAACCAGTGATACTGCCCACCAAGATTGAACTTCCGCCTCTG
CTCCGCGAACTGGTATCGGAGGAAACGGGCAACCCCAATCCCCAGATGAA
GGTCCACTACAAACTGACCGACAACAAAATGGCCAGATTAGCCAAGGATG
GAGAAAAGCCAACTGTTAACTTTGCCCTTGGTGTGGGCCAGCCGAAACCC
GTGAGCGCCAAGCTTTACGAAGGATTATTATAAAAGCTTTCTAGACCAT

BS26110.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:29
Subject Length Description Subject Range Query Range Score Percent Strand
mRpS34-RA 567 CG42648-PA 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:30
Subject Length Description Subject Range Query Range Score Percent Strand
mRpS34-RA 709 CG13037-RA 94..660 17..583 2835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16348167..16348733 17..583 2835 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:35:28 has no hits.

BS26110.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:33 Download gff for BS26110.complete
Subject Subject Range Query Range Percent Splice Strand
mRpS34-RA 71..635 17..581 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:04:44 Download gff for BS26110.complete
Subject Subject Range Query Range Percent Splice Strand
mRpS34-RA 94..658 17..581 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:22:44 Download gff for BS26110.complete
Subject Subject Range Query Range Percent Splice Strand
mRpS34-RA 94..658 17..581 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:22:44 Download gff for BS26110.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16348167..16348731 17..581 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:04:44 Download gff for BS26110.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16341267..16341831 17..581 100   Plus

BS26110.pep Sequence

Translation from 16 to 582

> BS26110.pep
MAQKVIKYIGRTTDFRGNTLWELVSNLPNWGVGRLLIRNMFQRYPEPCYM
RILKVQSVDEQPGEIRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVP
QDQEAKYLNNKKKVEPVILPTKIELPPLLRELVSEETGNPNPQMKVHYKL
TDNKMARLAKDGEKPTVNFALGVGQPKPVSAKLYEGLL*

BS26110.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
mRpS34-PA 188 CG13037-PA 1..188 1..188 987 100 Plus