Clone BS26113 Report

Search the DGRC for BS26113

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:261
Well:13
Vector:pDNR-Dual
Associated Gene/Transcriptmtacp1-RA
Protein status:BS26113.pep: gold
Sequenced Size:491

Clone Sequence Records

BS26113.complete Sequence

491 bp assembled on 2011-08-24

GenBank Submission: KX805155

> BS26113.complete
GAAGTTATCAGTCGACATGTCGTTCACACAGATCGCGCGCAGCTGCAGTC
GACTGGCGGCCACTTTGGCCCCAAGGAGGGTCGCCTCCGGCATTCTCATC
CAATCACAGGCCTCCAGGATGATGCACAGGATCGCCGTGCCATCGATGAC
CAGCCAGTTGAGCCAAGAGTGCCGTGGTCGCTGGCAAACGCAATTGGTGC
GCAGATACTCGGCGAAACCGCCGCTCTCGCTGAAGCTGATCAATGAGCGC
GTCTTGCTTGTGCTCAAGCTCTACGACAAGATCGATCCCAGCAAGCTCAA
CGTTGAGTCGCACTTCATCAACGACTTGGGACTGGATTCCTTGGACCACG
TGGAGGTCATCATGGCCATGGAGGACGAGTTCGGTTTCGAGATCCCCGAC
TCTGATGCCGAGAAGCTGCTTAAACCTGCCGACATTATTAAGTACGTCGC
CGACAAGGAGGATGTGTACGAGTAAAAGCTTTCTAGACCAT

BS26113.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:38:59
Subject Length Description Subject Range Query Range Score Percent Strand
mtacp1-RA 459 CG9160-PA 1..459 17..475 2295 100 Plus
mtacp1-RC 546 CG9160-PC 236..546 165..475 1555 100 Plus
mtacp1-RB 432 CG9160-PB 250..432 293..475 915 100 Plus
mtacp1-RC 546 CG9160-PC 1..154 17..170 755 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:39:00
Subject Length Description Subject Range Query Range Score Percent Strand
mtacp1-RA 740 CG9160-RA 106..569 13..476 2305 99.8 Plus
mtacp1-RC 739 CG9160-RC 345..656 165..476 1560 100 Plus
mtacp1-RB 625 CG9160-RB 359..542 293..476 920 100 Plus
mtacp1-RC 739 CG9160-RC 106..263 13..170 760 98.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1331278..1331460 294..476 915 100 Plus
3L 28110227 3L 1330137..1330291 13..167 760 99.4 Plus
3L 28110227 3L 1331038..1331177 163..302 655 97.9 Plus
Blast to na_te.dros performed 2014-11-26 16:38:58
Subject Length Description Subject Range Query Range Score Percent Strand
X-element 4740 X-element ROXELEMENT 4740bp 3462..3553 371..462 117 61.3 Plus

BS26113.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:37 Download gff for BS26113.complete
Subject Subject Range Query Range Percent Splice Strand
mtacp1-RA 253..709 17..473 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:06:08 Download gff for BS26113.complete
Subject Subject Range Query Range Percent Splice Strand
mtacp1-RA 110..566 17..473 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:02 Download gff for BS26113.complete
Subject Subject Range Query Range Percent Splice Strand
mtacp1-RA 110..566 17..473 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:02 Download gff for BS26113.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1330141..1330290 17..166 100 -> Plus
3L 1331042..1331170 167..295 100 -> Plus
3L 1331280..1331457 296..473 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:06:08 Download gff for BS26113.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1330141..1330290 17..166 100 -> Plus
arm_3L 1331042..1331170 167..295 100 -> Plus
arm_3L 1331280..1331457 296..473 100   Plus

BS26113.pep Sequence

Translation from 16 to 474

> BS26113.pep
MSFTQIARSCSRLAATLAPRRVASGILIQSQASRMMHRIAVPSMTSQLSQ
ECRGRWQTQLVRRYSAKPPLSLKLINERVLLVLKLYDKIDPSKLNVESHF
INDLGLDSLDHVEVIMAMEDEFGFEIPDSDAEKLLKPADIIKYVADKEDV
YE*

BS26113.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:20
Subject Length Description Subject Range Query Range Score Percent Strand
mtacp1-PA 152 CG9160-PA 1..152 1..152 761 100 Plus
mtacp1-PC 181 CG9160-PC 1..181 1..152 721 84 Plus
mtacp1-PB 143 CG9160-PB 1..143 1..152 572 81.6 Plus