BS26114.complete Sequence
416 bp assembled on 2011-08-24
GenBank Submission: KX803361
> BS26114.complete
GAAGTTATCAGTCGACATGACTGAGGAAGTTAATCCCAAGGCATTCCCGC
TGGCCGATGCCCAGCTTACCGCCAAGATCATGAACTTGCTGCAGCAAGCA
TTGAACTACAATCAACTGCGCAAGGGAGCCAACGAGGCCACCAAGACCCT
CAATCGCGGACTGGCCGATATTGTGGTGCTGGCCGGTGATGCGGAGCCCA
TCGAGATTCTGCTCCATTTGCCGCTCCTGTGCGAGGACAAGAACGTGCCC
TACGTCTTCGTTCGTTCCAAGCAGGCCTTGGGGCGTGCGTGCGGAGTTTC
CCGGCCAATAGTCGCCTGCTCTGTGACCACCAACGAGGGCAGCCAGCTCA
AGTCGCAGATCACCTCCATTCAGCAGGAGATCGAGCGACTGCTAGTCTAG
AAGCTTTCTAGACCAT
BS26114.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:39:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoip-RB | 384 | CG3949-PB | 1..384 | 17..400 | 1920 | 100 | Plus |
| hoip-RA | 384 | CG3949-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoip-RB | 607 | CG3949-RB | 145..528 | 17..400 | 1920 | 100 | Plus |
| hoip-RA | 569 | CG3949-RA | 107..490 | 17..400 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:39:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9699999..9700380 | 19..400 | 1910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:39:07 has no hits.
BS26114.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:38 Download gff for
BS26114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoip-RA | 145..528 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:06:13 Download gff for
BS26114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoip-RA | 107..490 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:08 Download gff for
BS26114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoip-RA | 107..490 | 17..400 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:08 Download gff for
BS26114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9699998..9700380 | 17..400 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:06:13 Download gff for
BS26114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9699998..9700380 | 17..400 | 99 | | Plus |
BS26114.pep Sequence
Translation from 16 to 399
> BS26114.pep
MTEEVNPKAFPLADAQLTAKIMNLLQQALNYNQLRKGANEATKTLNRGLA
DIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVA
CSVTTNEGSQLKSQITSIQQEIERLLV*
BS26114.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoip-PB | 127 | CG3949-PB | 1..127 | 1..127 | 631 | 100 | Plus |
| hoip-PA | 127 | CG3949-PA | 1..127 | 1..127 | 631 | 100 | Plus |
| NHP2-PB | 160 | CG5258-PB | 37..156 | 5..125 | 194 | 35.2 | Plus |
| NHP2-PA | 160 | CG5258-PA | 37..156 | 5..125 | 194 | 35.2 | Plus |
