BS26130.complete Sequence
2000 bp assembled on 2011-09-19
GenBank Submission: KX805774
> BS26130.complete
GAAGTTATCAGTCGACATGAAGCCACCACTATCATCGATCACCCGGCTGG
TAGTGATCCTCGGCGTGATGCTGCTGAAGCTGGCGGCAGCCCAGGATTGT
CAGCAGCAATTGGACAACGACACTGATGCGGAGGTGAAGCCGTGCGAGAA
TTTTCATCAGTATGCCTGCGGAAATTGGTATTCGAACACTTCGCAGCGAA
TTCTCGGTGCCCACGATATGCGATCCAAGTGGGTGGCAAATCTGAAGCTT
CAGCTTATCCGATATCTAGAGGAATCATCATCCACCGATAGCTTCAGTGC
CAATACCTCCGTCACCACTTCAACCGCCCAGTTGGGCACATTATACAGAT
GCTGCTTGTTGAGTGGCCAGTCGATAAGAACCTACACCGATGCCCTGTCA
CGAAGTGGTGCCAACTTCCCTCTGCTGGCCAACCATACTGGTGGATCCTT
CGATTGGGTTCTGGCCAATGCCGCCCTGCGTACGTACGGAGCTCAGGGTC
TTTGGCGACTCTTGGTCAAGGACAATTGGCAGTCGGCGGATCAGAGGATC
TTCTACATGCTGCCACCCAAGTTCGATCTACTGGGCCGCGATGATGAATT
GAATGAGTTTCTGTATCAGCGCTACCTGAAGATTTTGCTCTTGGAATTGG
GCTTGCGAGTGCGTAGAGCTGCTCTGCTGGCCGAGAAATTGGTTGCATTC
GAGAAGAGTCTGCAGAAGCTATTGCCCAACGATGCGGAACAGACGTTGGT
GCTGCGAAAGCCCCAGAGCCTTAAGGATTTAGAGTCGCAGCTGCCGCGGC
TGGAGTTGAAAAGATACTTTGAGACGATCCTAGAGGGTATCGATTGGGAT
TCAAAGACACTGTTACTGGTGGCGGATTTGGACTATCTACAGGGTCTGCA
GCGATTACTGGCGGAGCACACTTCGGATCCCATGGTCCTGTCCACTTGGC
TGCTCCTTCAGTTACCCGCTTATTTCGAATTGCGATTACATGATGACGAT
AAACTGGGCAACCAGCGGAATCATTGCCTGGAACAGTTGAGGAAACTAAT
GCCCGGACAACTGGGACGTCTGCAAATGCAATTGGTATTGGGCGAATCGT
ATCAGGATGTCTATGACACTGCCATACAGCAGATAGCCGTGCTCTTTCGC
GATCTAAAGCAGCAATTTGAGTTGGTACTAAATGAAACGGAGGTCTTCAA
CGAGGATTTGGTCACACGAAACTTGGCTCGTGATAAACTGAGGGCGATGC
GTTTGCTAACGCCACGTCTACAGGATCCCATCAATGGTGGTCCTGGCACG
CCTCAACTGGGCGGCAATTGTGATGCGAACCTATTGCAGTTGTCACTTAG
CCAAGCCAAATTGGAATATCGTCAGGTTTTTGGTGAGCCCGTGACTTCGG
TGCCAGCGGATCCGTTGTCTGTGAATGCATACTATCGCCTCAAGTTGAAT
CGGATTGAGTTGCCGCTCGGCCTGATGGCCACGCCCCTTATACAGCAGCA
ATGCTCCAAGGAGGCGGACACTAGGGCCAAACTATCCGCCGGATTGGGCT
ACATTCTGGCCCACGAAATGGTGCACGCCTTCGATTTGGATGGCCTTAAT
TACGATGCCACCGGTCAGTTGGCCAATGGCCAGTGGTCGGCCAGGGCGAT
TATCCGTTTCGGTCTGAGAGCCGGTTGCTATTTGGGCGTACGGTATAGTA
ATGCCACGCTAACCGTCAACGAGAATATCGCGGATACCGAGGGACTACGA
CTGGCCCTCGACACATATCGCCATCGGAGTGGAGCTACAAATTTGCGTAC
CTTCTTTGTGGCCTTTGCCCAAAATTGGTGTGGCACAGTGGCCAGTACGT
CGGGCTTGAGCCAACATGCCGGCCATGCCGAGCGGGTCAATAATGTAGTG
GGCAATATGCCGGAATTTGGGGACACATTCGAGTGCAAGGCAACCAGCCA
GATGAATCCCGTTAACAAGTGTCACATTTGGTGAAAGCTTTCTAGACCAT
BS26130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:29:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3775-RB | 1968 | CG3775-PB | 1..1968 | 17..1984 | 9840 | 100 | Plus |
| CG3775-RA | 1968 | CG3775-PA | 1..1968 | 17..1984 | 9840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:29:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3775-RB | 2126 | CG3775-RB | 48..2015 | 17..1984 | 9840 | 100 | Plus |
| CG3775-RA | 2572 | CG3775-RA | 48..2015 | 17..1984 | 9840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:29:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12801708..12803675 | 17..1984 | 9840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:29:45 has no hits.
BS26130.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:17:23 Download gff for
BS26130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3775-RA | 1..1967 | 17..1983 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:31:56 Download gff for
BS26130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3775-RA | 48..2014 | 17..1983 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:20:15 Download gff for
BS26130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3775-RA | 48..2014 | 17..1983 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:20:15 Download gff for
BS26130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12801708..12803674 | 17..1983 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:31:56 Download gff for
BS26130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12695741..12697707 | 17..1983 | 100 | | Plus |
BS26130.pep Sequence
Translation from 16 to 1983
> BS26130.pep
MKPPLSSITRLVVILGVMLLKLAAAQDCQQQLDNDTDAEVKPCENFHQYA
CGNWYSNTSQRILGAHDMRSKWVANLKLQLIRYLEESSSTDSFSANTSVT
TSTAQLGTLYRCCLLSGQSIRTYTDALSRSGANFPLLANHTGGSFDWVLA
NAALRTYGAQGLWRLLVKDNWQSADQRIFYMLPPKFDLLGRDDELNEFLY
QRYLKILLLELGLRVRRAALLAEKLVAFEKSLQKLLPNDAEQTLVLRKPQ
SLKDLESQLPRLELKRYFETILEGIDWDSKTLLLVADLDYLQGLQRLLAE
HTSDPMVLSTWLLLQLPAYFELRLHDDDKLGNQRNHCLEQLRKLMPGQLG
RLQMQLVLGESYQDVYDTAIQQIAVLFRDLKQQFELVLNETEVFNEDLVT
RNLARDKLRAMRLLTPRLQDPINGGPGTPQLGGNCDANLLQLSLSQAKLE
YRQVFGEPVTSVPADPLSVNAYYRLKLNRIELPLGLMATPLIQQQCSKEA
DTRAKLSAGLGYILAHEMVHAFDLDGLNYDATGQLANGQWSARAIIRFGL
RAGCYLGVRYSNATLTVNENIADTEGLRLALDTYRHRSGATNLRTFFVAF
AQNWCGTVASTSGLSQHAGHAERVNNVVGNMPEFGDTFECKATSQMNPVN
KCHIW*
BS26130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3775-PB | 655 | CG3775-PB | 1..655 | 1..655 | 3390 | 100 | Plus |
| CG3775-PA | 655 | CG3775-PA | 1..655 | 1..655 | 3390 | 100 | Plus |
| CG9507-PA | 684 | CG9507-PA | 38..684 | 30..655 | 372 | 24.6 | Plus |
| CG15485-PB | 669 | CG15485-PB | 9..669 | 5..655 | 332 | 25.4 | Plus |
| CG15485-PA | 669 | CG15485-PA | 9..669 | 5..655 | 332 | 25.4 | Plus |
