BS26133.complete Sequence
941 bp assembled on 2011-08-24
GenBank Submission: KX800855
> BS26133.complete
GAAGTTATCAGTCGACATGAACAGTGCCGTACCGCCCGGCGTGTTGGGAC
TACCCTATCGATTTTCGGATGAGCGTACGGTCAAGTTCGTAGAGCTTTAC
GGCCGGGAACCTTGTCTCTGGAACAAGCGACCATATTTGCGACGAGCTCG
AAGCGCCGCCTATCGGCGAATTCAGTCCGGGATCAATGCTGATATTGAAC
CATATGAGTCAGGTCTTACCATCCAGGGCGTAAAGATGAAGATCAAGAAT
CTTCGTACTGGGTACCACCAGGAGCTAAAGAAGATCCGAACTATTCCGGG
ATATCAGCCAAAGACGCCCTGGTTTGCCCCACTTCACGGGTTTTTGGCAG
AGTTCTTGGACACGAATGAGTTGGAAACATCAATTCCTCAACTAAAGCGC
CTACAGATTCGACTTACCAGACTGAAGCCGATTAAGATTCAGACGGAGAT
TAAGCCAGATCCCGATGACTTGTCAGTCCCCGATAGGCCGTTGGATGCTA
CACCCTCTTCCTTATTTACCGTTCTGCCAGCACCTATGCCCGTGGAGGAG
CCTCCCACTCCACCGCCTTCCGTGCCCAAGATCGGAGACATCATCTCACC
AGTACATCCAGACCCAGCGCCTGTTCCGATAGCAGGGAACTGTCCTCTGT
CGACAGCCTGCTCCATTTCTGAAAAAAGTGAGGTCTTGGGATTGGGCCTG
GGAGTATCGGCAGCTGGACGGACGAATGGAGTTGGCCTTGGAGTTGAAAT
GCGAGGCGAGGACGAATTCACCTACTTCGGGTTGAGCGTTGCAGCGCAAA
TCCGTAATATGCCATTGGCCAGTGCCATGCTAATGCAGTCGAAAATCCAG
TATATGCTCTCTATGGAGCGTCGTAAGATTAACGGTCATCCTGGCGATAT
GGACATATTTCTAACTAAAAACTAAAAGCTTTCTAGACCAT
BS26133.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:41:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30403-RB | 909 | CG30403-PB | 1..909 | 17..925 | 4545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30403-RB | 1268 | CG30403-RB | 145..1054 | 16..925 | 4550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21710109..21710670 | 925..364 | 2810 | 100 | Minus |
| 2R | 25286936 | 2R | 21711121..21711469 | 364..16 | 1745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:41:55 has no hits.
BS26133.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:41 Download gff for
BS26133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30403-RB | 142..1041 | 17..916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:25 Download gff for
BS26133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30403-RB | 146..1045 | 17..916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:24 Download gff for
BS26133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30403-RB | 146..1045 | 17..916 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:24 Download gff for
BS26133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21710118..21710669 | 365..916 | 100 | <- | Minus |
| 2R | 21711121..21711468 | 17..364 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:25 Download gff for
BS26133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17597623..17598174 | 365..916 | 100 | <- | Minus |
| arm_2R | 17598626..17598973 | 17..364 | 100 | | Minus |
BS26133.pep Sequence
Translation from 16 to 924
> BS26133.pep
MNSAVPPGVLGLPYRFSDERTVKFVELYGREPCLWNKRPYLRRARSAAYR
RIQSGINADIEPYESGLTIQGVKMKIKNLRTGYHQELKKIRTIPGYQPKT
PWFAPLHGFLAEFLDTNELETSIPQLKRLQIRLTRLKPIKIQTEIKPDPD
DLSVPDRPLDATPSSLFTVLPAPMPVEEPPTPPPSVPKIGDIISPVHPDP
APVPIAGNCPLSTACSISEKSEVLGLGLGVSAAGRTNGVGLGVEMRGEDE
FTYFGLSVAAQIRNMPLASAMLMQSKIQYMLSMERRKINGHPGDMDIFLT
KN*
BS26133.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30403-PB | 302 | CG30403-PB | 1..302 | 1..302 | 1581 | 100 | Plus |
