BS26138.complete Sequence
749 bp assembled on 2011-08-24
GenBank Submission: KX805162
> BS26138.complete
GAAGTTATCAGTCGACATGGCCCTGTCCAAGATCGACACCGAGATCGAGC
AGGTTGACCAGGAGAAGTACCTGCGTCAGGCCACTAGCTACTATCAGCCG
CTGGAGAAACCCCTGAAATACGGACCGGAGGTGAATTCCCTATCGGACTT
GGTGGCCGCCCTTCACCGGGAATTCGAGTCGAACTATGTTAACATCGAGA
TGGTGAATCACCTTATGCTCAGCTACAAGTCCAATCCGCGGGAGTGGCGC
AAATATGCCAAGTTCGATCGTTACACCTACACGCGGAATCTCGTGGATGC
TGGCAATGGAAAGTTCAATCTGCTGATTCTGTGCTGGGGCGAAGGACACG
GCTCCTCGGTGCACGACCATGCCGATTCCCATTGCTTCATGAAGATGCTG
AAGGGTGATCTGCGCGAGAAGCGCTACGAGTATCCCAATAGATCTGCCAG
GGACAACGGCCGGTCCCATCATCCCGATGGCGAGATCGATAGCCGAGAGC
TGGTGGAGATTGGGGAGACACCAATCGCCGTCAATGATGTGGCCTACATA
AATGACAATCTGGGTCTGCATCGCGTGGAGAACCCCAGCCATTCGGATAC
CTCTGTCTCCCTTCACCTATACTGTCCACCCTTCGACACGTGCTCCGTGT
TCCAGGACAACCTGAAGAAGACCACCGCCAAGGTCACCTTCTGGAGCAAA
TACGGCGTGAGGACGAAGCAGAACGAGCAGTAGAAGCTTTCTAGACCAT
BS26138.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:43:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5493-RD | 717 | CG5493-PD | 1..717 | 17..733 | 3585 | 100 | Plus |
| CG5493-RC | 717 | CG5493-PC | 1..717 | 17..733 | 3585 | 100 | Plus |
| CG5493-RB | 717 | CG5493-PB | 1..717 | 17..733 | 3585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5493-RD | 1031 | CG5493-RD | 63..780 | 17..734 | 3590 | 100 | Plus |
| CG5493-RC | 1130 | CG5493-RC | 162..879 | 17..734 | 3590 | 100 | Plus |
| CG5493-RB | 1161 | CG5493-RB | 193..910 | 17..734 | 3590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18617200..18617737 | 554..17 | 2690 | 100 | Minus |
| 2R | 25286936 | 2R | 18616943..18617123 | 734..554 | 905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:43:40 has no hits.
BS26138.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:44 Download gff for
BS26138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5493-RA | 203..919 | 17..733 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:08:12 Download gff for
BS26138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5493-RB | 193..909 | 17..733 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:01 Download gff for
BS26138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5493-RB | 193..909 | 17..733 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:01 Download gff for
BS26138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18616944..18617122 | 555..733 | 100 | <- | Minus |
| 2R | 18617200..18617737 | 17..554 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:08:12 Download gff for
BS26138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14504449..14504627 | 555..733 | 100 | <- | Minus |
| arm_2R | 14504705..14505242 | 17..554 | 100 | | Minus |
BS26138.pep Sequence
Translation from 16 to 732
> BS26138.pep
MALSKIDTEIEQVDQEKYLRQATSYYQPLEKPLKYGPEVNSLSDLVAALH
REFESNYVNIEMVNHLMLSYKSNPREWRKYAKFDRYTYTRNLVDAGNGKF
NLLILCWGEGHGSSVHDHADSHCFMKMLKGDLREKRYEYPNRSARDNGRS
HHPDGEIDSRELVEIGETPIAVNDVAYINDNLGLHRVENPSHSDTSVSLH
LYCPPFDTCSVFQDNLKKTTAKVTFWSKYGVRTKQNEQ*
BS26138.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5493-PD | 238 | CG5493-PD | 1..238 | 1..238 | 1282 | 100 | Plus |
| CG5493-PC | 238 | CG5493-PC | 1..238 | 1..238 | 1282 | 100 | Plus |
| CG5493-PB | 238 | CG5493-PB | 1..238 | 1..238 | 1282 | 100 | Plus |
| CG5493-PA | 238 | CG5493-PA | 1..238 | 1..238 | 1282 | 100 | Plus |
