BS26139.complete Sequence
425 bp assembled on 2011-08-24
GenBank Submission: KX802648
> BS26139.complete
GAAGTTATCAGTCGACATGAGTAAACCTGGCAGTGCTCCTCCGCAGTTCA
CCTATGTGCCGCCCCCTTCGGCCCCGCCCTCTTACCAGGAGGCGGTGGGC
GGAGTGAAGCCGGTGGGTCCATATACGCCCGTGGTGGCGCCCGCAACCAC
GGCAAATACCACGATTGTGACCACGGTTGTGCCCATTAGCCGCACTTCGA
CGCACATGATCTGTCCATCGTGCCATGCCGAGATCGAGACGACTACGCGC
ACCGAGCCGGGAATGATTGCCTACTTGTCCGGATTTTTGATTGCCCTATT
TGGTTGCTGGCTGGGATGCTGCCTAATACCTTGCTGCATCGACGACTGCA
TGGATGTGCATCACTCGTGCCCCAACTGCCGCGCATATTTGGGGCGATAC
CGTCGATAGAAGCTTTCTAGACCAT
BS26139.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32280-RD | 393 | CG32280-PD | 1..393 | 17..409 | 1965 | 100 | Plus |
CG32280-RC | 393 | CG32280-PC | 1..393 | 17..409 | 1965 | 100 | Plus |
CG32280-RB | 393 | CG32280-PB | 1..393 | 17..409 | 1965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32280-RD | 1279 | CG32280-RD | 245..639 | 15..409 | 1975 | 100 | Plus |
CG32280-RC | 1440 | CG32280-RC | 406..800 | 15..409 | 1975 | 100 | Plus |
CG32280-RB | 1144 | CG32280-RB | 110..504 | 15..409 | 1975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3167977..3168265 | 15..303 | 1445 | 100 | Plus |
3L | 28110227 | 3L | 3168334..3168440 | 303..409 | 535 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:35:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc4-element | 2791 | Doc4-element DOC4 2791bp | 2582..2683 | 378..275 | 118 | 61 | Minus |
BS26139.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:33 Download gff for
BS26139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32280-RC | 408..800 | 17..409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:04:39 Download gff for
BS26139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32280-RA | 79..471 | 17..409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:22:38 Download gff for
BS26139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32280-RB | 112..504 | 17..409 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:22:38 Download gff for
BS26139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3167979..3168265 | 17..303 | 100 | -> | Plus |
3L | 3168335..3168440 | 304..409 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:04:39 Download gff for
BS26139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3167979..3168265 | 17..303 | 100 | -> | Plus |
arm_3L | 3168335..3168440 | 304..409 | 100 | | Plus |
BS26139.pep Sequence
Translation from 16 to 408
> BS26139.pep
MSKPGSAPPQFTYVPPPSAPPSYQEAVGGVKPVGPYTPVVAPATTANTTI
VTTVVPISRTSTHMICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLG
CCLIPCCIDDCMDVHHSCPNCRAYLGRYRR*
BS26139.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32280-PD | 130 | CG32280-PD | 1..130 | 1..130 | 728 | 100 | Plus |
CG32280-PC | 130 | CG32280-PC | 1..130 | 1..130 | 728 | 100 | Plus |
CG32280-PB | 130 | CG32280-PB | 1..130 | 1..130 | 728 | 100 | Plus |
CG32280-PA | 130 | CG32280-PA | 1..130 | 1..130 | 728 | 100 | Plus |
CG13510-PC | 129 | CG13510-PC | 6..127 | 15..128 | 217 | 36.6 | Plus |