BS26143.complete Sequence
699 bp assembled on 2011-08-24
GenBank Submission: KX804409
> BS26143.complete
GAAGTTATCAGTCGACATGGAGGAATTTAATTCGAGCGGATCAGTAGTTA
ATGGTACAGGATCTACGGAAGTTCCTCAATCTAATGCTGAAGTTATAAGG
GGACAAATATTTGAAGTTGGTCCTAGGTATATTAAACTCGCCTATATAGG
TGAAGGAGCTTATGGCATGGTTGTGTCTGCGGATGACACGCTAACAAACC
AAAGAGTTGCAATAAAAAAAATATCGCCCTTTGAACACCAAACTTATTGT
CAAAGGACTCTCAGAGAAATAACCATATTGACCAGATTTAAACATGAAAA
CATTATTGATATTCGAGATATTCTTCGAGTTGATAGCATAGACCAAATGA
GAGATGTTTATATTGTACAGTGTTTGATGGAGACTGATTTGTATAAACTA
CTTAAAACACAGGTAATGGTGCTCCCTGATATTTGGTTAAAATTTATTGA
AAGAATAACTACCATTGATATGTGGTGTATTATCTTGGCCATTACTCCAA
ATACCAAGACTGAGTACAATTGTAGGTTGTCGGACATTTTCAATTATGGA
AGTGATTCGCGTTATGCTTTCATGCGGGCTTTAAAATGAAAGCTTTCTAG
ACCATTCGTGGGGGGGCGAAAGGGGGGAGGTAAGTGGTCTTTATCATATT
TCATAATTATTATGTAAATCTATAAGTATCCTTAAGGTTAATTTTTGAT
BS26143.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:44:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
rl-RA | 573 | CG12559-PA | 1..573 | 17..589 | 2865 | 100 | Plus |
rl-RI | 1131 | CG12559-PI | 1..396 | 17..412 | 1980 | 100 | Plus |
rl-RC | 1131 | CG12559-PC | 1..396 | 17..412 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
rl-RA | 1412 | CG12559-RA | 307..880 | 16..589 | 2870 | 100 | Plus |
rl-RI | 2072 | CG12559-RI | 102..498 | 16..412 | 1985 | 100 | Plus |
rl-RC | 1614 | CG12559-RC | 126..522 | 16..412 | 1985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 1080331..1080618 | 302..589 | 1440 | 100 | Plus |
2R | 25286936 | 2R | 1072281..1072441 | 16..176 | 805 | 100 | Plus |
2R | 25286936 | 2R | 1076635..1076761 | 175..301 | 635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:44:58 has no hits.
BS26143.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:45 Download gff for
BS26143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
rl-RA | 325..900 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:08:47 Download gff for
BS26143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
rl-RA | 308..883 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:33 Download gff for
BS26143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
rl-RA | 308..883 | 17..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:33 Download gff for
BS26143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 1072282..1072439 | 17..174 | 100 | -> | Plus |
2R | 1076635..1076761 | 175..301 | 100 | -> | Plus |
2R | 1080331..1080621 | 302..594 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:08:47 Download gff for
BS26143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2RHet | 198996..199153 | 17..174 | 100 | -> | Plus |
2RHet | 203349..203475 | 175..301 | 100 | -> | Plus |
2RHet | 207045..207335 | 302..594 | 98 | | Plus |
BS26143.pep Sequence
Translation from 16 to 588
> BS26143.pep
MEEFNSSGSVVNGTGSTEVPQSNAEVIRGQIFEVGPRYIKLAYIGEGAYG
MVVSADDTLTNQRVAIKKISPFEHQTYCQRTLREITILTRFKHENIIDIR
DILRVDSIDQMRDVYIVQCLMETDLYKLLKTQVMVLPDIWLKFIERITTI
DMWCIILAITPNTKTEYNCRLSDIFNYGSDSRYAFMRALK*
BS26143.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
rl-PA | 190 | CG12559-PA | 1..190 | 1..190 | 980 | 100 | Plus |
rl-PI | 376 | CG12559-PI | 1..132 | 1..132 | 670 | 100 | Plus |
rl-PC | 376 | CG12559-PC | 1..132 | 1..132 | 670 | 100 | Plus |
rl-PD | 376 | CG12559-PD | 1..132 | 1..132 | 670 | 100 | Plus |
rl-PE | 376 | CG12559-PE | 1..132 | 1..132 | 670 | 100 | Plus |