BS26144.complete Sequence
587 bp assembled on 2011-08-24
GenBank Submission: KX800656
> BS26144.complete
GAAGTTATCAGTCGACATGACGGCCAAGATGAAGCTGCGGTCCCAGCTGC
ATCTGCTCACTGGTTTCATGGCTGGATTCGTGCTGGCCTTCGTGCTCCTC
CTCTACGTCTACGATGTCAGCAGGGTGACGCCCTGCTGGAGCAGCACCTC
CACCATGACCACGGCCACAACGGCCAGGATTGAGGATGGTCCACCACCGC
GCATTCTGTGCATGGTGCTCACCTGTCCGGAGAACGTGCAGAGCCTGGCC
AGAAGTGTCTACGAGACCTGGGGCCAGCGCTGCAGCCGCCTGATCTTCGC
CAGCAGCGAGGACTACGAGCCACTGGGCGTGGTCGGTGTGGTGGAGCCAA
CTGGCGGTGGCTACGAGGATCTGTGGAATAAAACGCGCGAGGGATTCCGA
CACGTTTGGGAGCACTACGCTGGCGACTACGATTGGTTCCTCAAGGCAGA
TGACGATACGTACGTGGTCATGGAGAATCTGCAGCACCTGCTCCGTGGCT
TCGATCCGAATACGCCCGTCTTCTTTGGCTACAAGATGTCGCGATACAAT
GTGCTTCTGCATTTTGAATAGAAGCTTTCTAGACCAT
BS26144.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:45:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3119-RB | 555 | CG3119-PB | 1..555 | 17..571 | 2775 | 100 | Plus |
| CG3119-RA | 1068 | CG3119-PA | 1..537 | 17..553 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3119-RB | 682 | CG3119-RB | 46..601 | 17..572 | 2780 | 100 | Plus |
| CG3119-RA | 1193 | CG3119-RA | 46..582 | 17..553 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2837344..2837788 | 461..17 | 2225 | 100 | Minus |
| 2L | 23513712 | 2L | 2837193..2837286 | 553..460 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:45:25 has no hits.
BS26144.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:46 Download gff for
BS26144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3119-RB | 44..598 | 17..571 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:01 Download gff for
BS26144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3119-RB | 46..600 | 17..571 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:45 Download gff for
BS26144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3119-RB | 46..600 | 17..571 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:45 Download gff for
BS26144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2837346..2837788 | 17..459 | 100 | | Minus |
| 2L | 2836161..2836178 | 554..571 | 100 | <- | Minus |
| 2L | 2837193..2837286 | 460..553 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:01 Download gff for
BS26144.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2836161..2836178 | 554..571 | 100 | <- | Minus |
| arm_2L | 2837193..2837286 | 460..553 | 100 | <- | Minus |
| arm_2L | 2837346..2837788 | 17..459 | 100 | | Minus |
BS26144.pep Sequence
Translation from 16 to 570
> BS26144.pep
MTAKMKLRSQLHLLTGFMAGFVLAFVLLLYVYDVSRVTPCWSSTSTMTTA
TTARIEDGPPPRILCMVLTCPENVQSLARSVYETWGQRCSRLIFASSEDY
EPLGVVGVVEPTGGGYEDLWNKTREGFRHVWEHYAGDYDWFLKADDDTYV
VMENLQHLLRGFDPNTPVFFGYKMSRYNVLLHFE*
BS26144.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3119-PB | 184 | CG3119-PB | 1..184 | 1..184 | 997 | 100 | Plus |
| CG3119-PA | 355 | CG3119-PA | 1..179 | 1..179 | 970 | 100 | Plus |
| C1GalTA-PA | 388 | CG9520-PA | 100..213 | 62..177 | 317 | 47.4 | Plus |
| C1GalTA-PC | 388 | CG9520-PC | 100..213 | 62..177 | 317 | 47.4 | Plus |
| C1GalTA-PB | 388 | CG9520-PB | 100..213 | 62..177 | 317 | 47.4 | Plus |
