BS26146.complete Sequence
386 bp assembled on 2011-08-24
GenBank Submission: KX806255
> BS26146.complete
GAAGTTATCAGTCGACATGACAAACCGATGCGCTTGCTTCGCCTTGGCCT
TCCTCCTCTTCTGCCTCTTGGCCATCTCGAGCATCGAGGCAGCTCCGATG
CCCAGGTACCAATCCAATGGAGGATACGGTGGCGCTGGCTATAACGAACT
GGAGGAGGTGCCCGACGACCTACTCATGGAACTGATGACTCGCTTTGGAC
GCACCATCATACGGGCTCGAAACGATCTGGAGAATTCCAAACGAACCGTG
GACTTTGGCTTGGCCCGGGGATATTCGGGTACCCAGGAGGCGAAACATCG
CATGGGTCTGGCTGCAGCCAACTTTGCCGGAGGACCCGGTCGGAGGCGAC
GATCCGAGACCGATGTCTAAAAGCTTTCTAGACCAT
BS26146.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:42:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dh31-RC | 354 | CG13094-PC | 1..354 | 17..370 | 1770 | 100 | Plus |
| Dh31-RA | 351 | CG13094-PA | 1..351 | 17..370 | 1690 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dh31-RC | 1295 | CG13094-RC | 143..496 | 17..370 | 1770 | 100 | Plus |
| Dh31-RA | 1292 | CG13094-RA | 143..493 | 17..370 | 1690 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8492667..8492802 | 370..235 | 680 | 100 | Minus |
| 2L | 23513712 | 2L | 8492967..8493092 | 234..109 | 630 | 100 | Minus |
| 2L | 23513712 | 2L | 8493744..8493835 | 108..17 | 460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:42:32 has no hits.
BS26146.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:42 Download gff for
BS26146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dh31-RC | 143..494 | 17..368 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:42 Download gff for
BS26146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dh31-RC | 143..494 | 17..368 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:37 Download gff for
BS26146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dh31-RC | 143..494 | 17..368 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:37 Download gff for
BS26146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8492669..8492802 | 235..368 | 100 | <- | Minus |
| 2L | 8492967..8493092 | 109..234 | 100 | <- | Minus |
| 2L | 8493744..8493835 | 17..108 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:42 Download gff for
BS26146.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8492669..8492802 | 235..368 | 100 | <- | Minus |
| arm_2L | 8492967..8493092 | 109..234 | 100 | <- | Minus |
| arm_2L | 8493744..8493835 | 17..108 | 100 | | Minus |
BS26146.pep Sequence
Translation from 16 to 369
> BS26146.pep
MTNRCACFALAFLLFCLLAISSIEAAPMPRYQSNGGYGGAGYNELEEVPD
DLLMELMTRFGRTIIRARNDLENSKRTVDFGLARGYSGTQEAKHRMGLAA
ANFAGGPGRRRRSETDV*
BS26146.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dh31-PC | 117 | CG13094-PC | 1..117 | 1..117 | 607 | 100 | Plus |
| Dh31-PA | 116 | CG13094-PA | 1..116 | 1..117 | 582 | 98.3 | Plus |
