BS26151.complete Sequence
1823 bp assembled on 2011-09-19
GenBank Submission: KX800568
> BS26151.complete
GAAGTTATCAGTCGACATGCAGTGCGACATACAGACAAGCCGACGCGAAT
GCCCGATAGAACCGACCACAGGCATGAATCGTAGGGGTTTGAACGCTGGC
AATACGATGACTTCTCAAGCGAACATTGACGACGGCAGCTGGAAGGCGGT
CTCCGAGGGCGGATCAATGCTGCCCGCGTCCAATTCGGCGGTCCTCAATC
CGGACGGGAGCAACCAGAGCGGCTTCGCGCAGGGCGGCCTGCCGTACAAC
TCGGCCGGGAATCCGTACCCGCCCGCCGGCCAATCCTCGCCAGCCGGCAA
CCAGTCCATCGTGTTCCAGAACTCCAACCAGCCTGGCTCGAACACACCTC
AGTATACCTCCTCACCTGCTCCCTCGGGCTCATCGACACCCGGACCTGTT
GGTGCGCAGAACATTCCCGGCAACTACCCGCAGTCGGCGACGGCGGGCAA
TTTCAATGGTCCAGTTGGCGGGCCCTTCGGCTCGCCATCCTCGGGACTCG
GCCAGTTCAGCCGGCCGGCCAGCTCGGGCACTCCGTTTAACAGTGGCCAG
GCCGGGCACTTCTCATCGCCCACGGTATTCAGCGTTGGCGGGCAATTCAA
TCCGATGCCGCCGGCGTCGCCATTCGGCCACGGAGGCAACCACCCGATGA
TGGGCGGGCCGCAGCAGATGGAACGCATCGACCAGGGCTTCAGGCGGCAC
AATTCCTACTTTAGCCACACGGAACACCGCGTCTTTGAGCTAAACAAGCG
GCTGCAGCAGCGCAACGAGGAGAGCGACAACTGCTGGTGGGACTCGTTTA
CCACGGAGTTCTTCGAGGATGATGCCCGGCTGACCATTCTGTTCTGCCTG
GAGGACGGACCGAAGCGGTACACCATCGGGCGCACGCTCATCCCGCGCTT
CTTCCGCAGCATATACGAGGGCGGCGTTTCGGACCTGTACTTTCAGCTGA
AGCATGCCAAGGAGTCGTTCCACAACACGTCCATCACGTTGGACTGCGAC
CAGTGCACGGTGATCACGCAGCACGGCAAGCCCTTCTTCACGAAGGTCTG
CGCCGACGCAAGACTGATCTTGGAGTTCATGTACGACGACTACATGCGCA
TCAAGTCATGGCACATGACCATCAAGGGACACCGCGAGCTCATTCCAAGG
TCCGTGATCGGCACCAGTCTGCCGCCTGACCCGATGCTGCTAGATCAAAT
AACCAAGAACATCACGCGCGCTGGCATCACCAACTCCACCCTCAACTATC
TGCGCCTCTGCGTCATCCTCGAACCGATGCAGGAGCTGATGTCGCGGCAC
AAGGCGTACGCACTGAGTCCGCGCGACTGCCTGAAGACAACGTTGTTCCA
GAAGTGGCAGCGCATGGTGGCTCCGCCCGGCAAGAAGGATCCGCAACGAC
CACCCAACAAGAGGCGCAAACGGAAGGGCTCCAATTCGGGTGGTGGCAAC
AACTCGAACACTCCGCCTGTGACGAACCAGAAGCGTTCCCCCTCCGGTCC
CAGTTTCTCCCTCTCCTCCCAGGACGTGATGGTGGTGGGCGAGCCGACGC
TGATGGGCGGCGAGTTTGGTGAGGAGGACGAGCGGCTGATCACCCGGCTA
GAGAACACGCAATACGACGGAACCAATGCCGTGGAGCACGATAATCACAC
CGGCTTTGGACACGCCGACTCGCCCATATCCGGCTCGAATCCGTGGAGCA
TCGACCGGGCGGGAGCCATCCCGGCCAGCCCTGGGAACGGAGCTGCCCCG
CAGAACAACGCGAATATATCTGACATAGATAAAAAGAGCCCCATTGTATC
GCAATAGAAGCTTTCTAGACCAT
BS26151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:21:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chi-RB | 1791 | CG3924-PB | 1..1791 | 17..1807 | 8940 | 99.9 | Plus |
| Chi-RA | 1734 | CG3924-PA | 1..1734 | 74..1807 | 8655 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:21:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chi-RB | 2125 | CG3924-RB | 69..1861 | 17..1809 | 8950 | 99.9 | Plus |
| Chi-RA | 2156 | CG3924-RA | 122..1892 | 39..1809 | 8840 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24031802..24033576 | 1809..35 | 8845 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:21:41 has no hits.
BS26151.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:42:30 Download gff for
BS26151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chi-RB | 69..1859 | 17..1807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:49:53 Download gff for
BS26151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chi-RB | 69..1859 | 17..1807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:40 Download gff for
BS26151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chi-RB | 69..1859 | 17..1807 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:40 Download gff for
BS26151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24031804..24033572 | 39..1807 | 99 | <- | Minus |
| 2R | 24033679..24033700 | 17..38 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:49:53 Download gff for
BS26151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19919327..19921095 | 39..1807 | 99 | <- | Minus |
| arm_2R | 19921202..19921223 | 17..38 | 100 | | Minus |
BS26151.pep Sequence
Translation from 16 to 1806
> BS26151.pep
MQCDIQTSRRECPIEPTTGMNRRGLNAGNTMTSQANIDDGSWKAVSEGGS
MLPASNSAVLNPDGSNQSGFAQGGLPYNSAGNPYPPAGQSSPAGNQSIVF
QNSNQPGSNTPQYTSSPAPSGSSTPGPVGAQNIPGNYPQSATAGNFNGPV
GGPFGSPSSGLGQFSRPASSGTPFNSGQAGHFSSPTVFSVGGQFNPMPPA
SPFGHGGNHPMMGGPQQMERIDQGFRRHNSYFSHTEHRVFELNKRLQQRN
EESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIY
EGGVSDLYFQLKHAKESFHNTSITLDCDQCTVITQHGKPFFTKVCADARL
ILEFMYDDYMRIKSWHMTIKGHRELIPRSVIGTSLPPDPMLLDQITKNIT
RAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQKWQRM
VAPPGKKDPQRPPNKRRKRKGSNSGGGNNSNTPPVTNQKRSPSGPSFSLS
SQDVMVVGEPTLMGGEFGEEDERLITRLENTQYDGTNAVEHDNHTGFGHA
DSPISGSNPWSIDRAGAIPASPGNGAAPQNNANISDIDKKSPIVSQ*
BS26151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chi-PB | 596 | CG3924-PB | 1..596 | 1..596 | 3215 | 100 | Plus |
| Chi-PA | 577 | CG3924-PA | 1..577 | 20..596 | 3109 | 100 | Plus |
