BS26159.complete Sequence
671 bp assembled on 2011-08-24
GenBank Submission: KX805424
> BS26159.complete
GAAGTTATCAGTCGACATGGGAGCTTTGTTTGGAAAAACCAGCAAAAAGA
CGGCTCCTAGTCGGATCACCGACCAGGACAAGGCGGTTCTGCAATTGAAG
CAACAGAGGGATCGTCTGAAGCAGTACCAAAAACGCATCGAGACGCAGTT
GGAGAATGATCGCCTCCTGGCAAGGAAGTGCCTACAGCAAGGTCGCAAGG
ACCGGGCCAAGCTGCTGCTGCGCAAGAAGAAGTACCAGGAGAGTCTGCTG
ACCAATGCCGACAAACAGCTGGAAAACCTGGAGAAGCTGGCTGCGGACAT
TGAGTTCGCCCAGGTGGAGATGAAGGTGCTGGACGGCCTCAAAGCGGGCA
ATGCTGCTCTGAAGAAGGTGCACGAAATGCTTGACATCGACGAAGTTGAG
CGAATCATGGACGAGACACGCGAGGGCATCGAAAAGCAGCAGGAAATAGA
CGCCATACTGACGGATGTGCTGACCACGCAGGACGAGGAGGACGTTTTGG
CCGAGCTGGATGCCCTGGAGGCGGAGGAAGAGCAGCAGAAGGGTGCACAG
CTGCCGGATGTGCCCACCGAAGATCTGCCCATTCCCGCTGAGATCGAGTC
CGTCGAGGAGCCGGCAAAGACCAAAGCAACCAAGAAAGTCCTGGTGGAGG
CATAGAAGCTTTCTAGACCAT
BS26159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:47:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps20-RC | 639 | CG4071-PC | 1..639 | 17..655 | 3195 | 100 | Plus |
Vps20-RA | 639 | CG4071-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps20-RC | 899 | CG4071-RC | 150..791 | 16..657 | 3210 | 100 | Plus |
Vps20-RA | 772 | CG4071-RA | 23..664 | 16..657 | 3210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22608856..22609311 | 202..657 | 2280 | 100 | Plus |
2R | 25286936 | 2R | 22608683..22608793 | 91..201 | 555 | 100 | Plus |
2R | 25286936 | 2R | 22608543..22608618 | 16..91 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:47:35 has no hits.
BS26159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:47 Download gff for
BS26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vps20-RA | 12..650 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:49 Download gff for
BS26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vps20-RA | 24..662 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:27:36 Download gff for
BS26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vps20-RA | 24..662 | 17..655 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:27:36 Download gff for
BS26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22608544..22608618 | 17..91 | 100 | -> | Plus |
2R | 22608684..22608793 | 92..201 | 100 | -> | Plus |
2R | 22608856..22609309 | 202..655 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:49 Download gff for
BS26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18496049..18496123 | 17..91 | 100 | -> | Plus |
arm_2R | 18496189..18496298 | 92..201 | 100 | -> | Plus |
arm_2R | 18496361..18496814 | 202..655 | 100 | | Plus |
BS26159.pep Sequence
Translation from 16 to 654
> BS26159.pep
MGALFGKTSKKTAPSRITDQDKAVLQLKQQRDRLKQYQKRIETQLENDRL
LARKCLQQGRKDRAKLLLRKKKYQESLLTNADKQLENLEKLAADIEFAQV
EMKVLDGLKAGNAALKKVHEMLDIDEVERIMDETREGIEKQQEIDAILTD
VLTTQDEEDVLAELDALEAEEEQQKGAQLPDVPTEDLPIPAEIESVEEPA
KTKATKKVLVEA*
BS26159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps20-PC | 212 | CG4071-PC | 1..212 | 1..212 | 1040 | 100 | Plus |
Vps20-PA | 212 | CG4071-PA | 1..212 | 1..212 | 1040 | 100 | Plus |
shrb-PA | 226 | CG8055-PA | 5..211 | 2..211 | 202 | 31.8 | Plus |
CG5498-PB | 448 | CG5498-PB | 239..400 | 17..180 | 156 | 25.9 | Plus |