BS26161.complete Sequence
1037 bp assembled on 2011-08-26
GenBank Submission: KX806198
> BS26161.complete
GAAGTTATCAGTCGACATGTACGAACTGAAGACTCTGCTGCCGCAATTCG
ACATAAAGCTGCCCACCTGCATGTATCCTCTCAAGAACGTTAGCCTGGCG
GCGGATTCCTTGGCCAGCGGCTCCTCCACATCCGCATCCACATCCGCGTC
CACATCATCATGCAAATTGGAGGCCAACAGGATCGACAGAACGGGACGAA
ACGCAGCCACATGTGCACTTGATTTGGACTCTTTAGGCCGACAAATACAG
CGACTGCTAAAGGACGATACGGCATCAGTGGCCGCCCGACAGGAGAAGGT
TCTCAAGCAGCTGGAGGAGCTGAAGGCGCAGCTGGGACAAATCCGGGCGG
GACTTGGTGTTTGTGGCAAGACTTTCCAGCACACGACTGCTTTCCAGAAT
GGTGGATTAAAGGAGGTGCCACTGCAGGATGTCGTCATCAATGGACATCC
CAACTTCATACCCTATGCCTTGTTGGCCCTGAAAAATGCCTGGCGCAATC
TGTACACTATTGATGTCAAGACCTTTACGCACTCTACGATGGCCGACATT
GGACCAGCAGCACGGGAATTCGAGGCCAACTTGGCGAAGGTTCCAGTAAA
CCCTGCTTTGCCCAAGATTAGTGTGACGCTCATCTGGAAGAACTGCGAAC
ACACCGAGATGATCAGCTCGCCCACCATGTACGTGCCCATCTACGGAGAG
GTGAACATCATTCGCTATCTGGGCCGTGTGGGTCCAGCCGAGTATCGTTA
TGAGGGCTCTCCGCTCTGCAATGAGATCGACCTTGTCCTGGACATTTGCT
ACCAACTGCTGCGCTGCAACACGCACAAAACGCAGGTGGCCATGGTGCGC
CTGCTGGACAAGCGACTGCAGAAGCAGCAGTATTTCGGTGGATCCCAGAT
GTCGGTGGCGGATGTCGGTGTCTACAGCTCACTGATACGCATGCCAGCTG
TTACCGAGAAGGATCTGACGCCTGCGCTAGTGGCTTGGAGAAAAAGGGCC
AAGCTCGTGGTTCAAATTTAAAAGCTTTCTAGACCAT
BS26161.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:06:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12304-RA | 1005 | CG12304-PA | 1..1005 | 17..1021 | 5025 | 100 | Plus |
CG12304-RB | 906 | CG12304-PB | 148..906 | 263..1021 | 3795 | 100 | Plus |
CG12304-RB | 906 | CG12304-PB | 1..147 | 17..163 | 735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:06:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12304-RA | 1150 | CG12304-RA | 98..1103 | 17..1022 | 5030 | 100 | Plus |
CG12304-RB | 1051 | CG12304-RB | 245..1004 | 263..1022 | 3800 | 100 | Plus |
CG12304-RB | 1051 | CG12304-RB | 98..244 | 17..163 | 735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15584923..15585300 | 645..1022 | 1890 | 100 | Plus |
3L | 28110227 | 3L | 15584638..15584869 | 414..645 | 1160 | 100 | Plus |
3L | 28110227 | 3L | 15584285..15584441 | 261..417 | 785 | 100 | Plus |
3L | 28110227 | 3L | 15583735..15583881 | 17..163 | 735 | 100 | Plus |
3L | 28110227 | 3L | 15583997..15584096 | 164..263 | 500 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:06:08 has no hits.
BS26161.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 10:14:18 Download gff for
BS26161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12304-RA | 93..1095 | 17..1019 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:45 Download gff for
BS26161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12304-RA | 98..1100 | 17..1019 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:13 Download gff for
BS26161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12304-RA | 98..1100 | 17..1019 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:13 Download gff for
BS26161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15584640..15584868 | 416..644 | 100 | -> | Plus |
3L | 15584923..15585297 | 645..1019 | 100 | | Plus |
3L | 15583735..15583881 | 17..163 | 100 | -> | Plus |
3L | 15583997..15584095 | 164..262 | 100 | -> | Plus |
3L | 15584287..15584439 | 263..415 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:45 Download gff for
BS26161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15576835..15576981 | 17..163 | 100 | -> | Plus |
arm_3L | 15577097..15577195 | 164..262 | 100 | -> | Plus |
arm_3L | 15577387..15577539 | 263..415 | 100 | -> | Plus |
arm_3L | 15577740..15577968 | 416..644 | 100 | -> | Plus |
arm_3L | 15578023..15578397 | 645..1019 | 100 | | Plus |
BS26161.pep Sequence
Translation from 16 to 1020
> BS26161.pep
MYELKTLLPQFDIKLPTCMYPLKNVSLAADSLASGSSTSASTSASTSSCK
LEANRIDRTGRNAATCALDLDSLGRQIQRLLKDDTASVAARQEKVLKQLE
ELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPY
ALLALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPK
ISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPL
CNEIDLVLDICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADV
GVYSSLIRMPAVTEKDLTPALVAWRKRAKLVVQI*
BS26161.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12304-PA | 334 | CG12304-PA | 1..334 | 1..334 | 1710 | 100 | Plus |
CG12304-PB | 301 | CG12304-PB | 1..301 | 1..334 | 1503 | 90.1 | Plus |