Clone BS26161 Report

Search the DGRC for BS26161

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:261
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptCG12304-RA
Protein status:BS26161.pep: gold
Sequenced Size:1037

Clone Sequence Records

BS26161.complete Sequence

1037 bp assembled on 2011-08-26

GenBank Submission: KX806198

> BS26161.complete
GAAGTTATCAGTCGACATGTACGAACTGAAGACTCTGCTGCCGCAATTCG
ACATAAAGCTGCCCACCTGCATGTATCCTCTCAAGAACGTTAGCCTGGCG
GCGGATTCCTTGGCCAGCGGCTCCTCCACATCCGCATCCACATCCGCGTC
CACATCATCATGCAAATTGGAGGCCAACAGGATCGACAGAACGGGACGAA
ACGCAGCCACATGTGCACTTGATTTGGACTCTTTAGGCCGACAAATACAG
CGACTGCTAAAGGACGATACGGCATCAGTGGCCGCCCGACAGGAGAAGGT
TCTCAAGCAGCTGGAGGAGCTGAAGGCGCAGCTGGGACAAATCCGGGCGG
GACTTGGTGTTTGTGGCAAGACTTTCCAGCACACGACTGCTTTCCAGAAT
GGTGGATTAAAGGAGGTGCCACTGCAGGATGTCGTCATCAATGGACATCC
CAACTTCATACCCTATGCCTTGTTGGCCCTGAAAAATGCCTGGCGCAATC
TGTACACTATTGATGTCAAGACCTTTACGCACTCTACGATGGCCGACATT
GGACCAGCAGCACGGGAATTCGAGGCCAACTTGGCGAAGGTTCCAGTAAA
CCCTGCTTTGCCCAAGATTAGTGTGACGCTCATCTGGAAGAACTGCGAAC
ACACCGAGATGATCAGCTCGCCCACCATGTACGTGCCCATCTACGGAGAG
GTGAACATCATTCGCTATCTGGGCCGTGTGGGTCCAGCCGAGTATCGTTA
TGAGGGCTCTCCGCTCTGCAATGAGATCGACCTTGTCCTGGACATTTGCT
ACCAACTGCTGCGCTGCAACACGCACAAAACGCAGGTGGCCATGGTGCGC
CTGCTGGACAAGCGACTGCAGAAGCAGCAGTATTTCGGTGGATCCCAGAT
GTCGGTGGCGGATGTCGGTGTCTACAGCTCACTGATACGCATGCCAGCTG
TTACCGAGAAGGATCTGACGCCTGCGCTAGTGGCTTGGAGAAAAAGGGCC
AAGCTCGTGGTTCAAATTTAAAAGCTTTCTAGACCAT

BS26161.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:06:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG12304-RA 1005 CG12304-PA 1..1005 17..1021 5025 100 Plus
CG12304-RB 906 CG12304-PB 148..906 263..1021 3795 100 Plus
CG12304-RB 906 CG12304-PB 1..147 17..163 735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:06:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG12304-RA 1150 CG12304-RA 98..1103 17..1022 5030 100 Plus
CG12304-RB 1051 CG12304-RB 245..1004 263..1022 3800 100 Plus
CG12304-RB 1051 CG12304-RB 98..244 17..163 735 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15584923..15585300 645..1022 1890 100 Plus
3L 28110227 3L 15584638..15584869 414..645 1160 100 Plus
3L 28110227 3L 15584285..15584441 261..417 785 100 Plus
3L 28110227 3L 15583735..15583881 17..163 735 100 Plus
3L 28110227 3L 15583997..15584096 164..263 500 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:06:08 has no hits.

BS26161.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 10:14:18 Download gff for BS26161.complete
Subject Subject Range Query Range Percent Splice Strand
CG12304-RA 93..1095 17..1019 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:45 Download gff for BS26161.complete
Subject Subject Range Query Range Percent Splice Strand
CG12304-RA 98..1100 17..1019 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:13 Download gff for BS26161.complete
Subject Subject Range Query Range Percent Splice Strand
CG12304-RA 98..1100 17..1019 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:13 Download gff for BS26161.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15584640..15584868 416..644 100 -> Plus
3L 15584923..15585297 645..1019 100   Plus
3L 15583735..15583881 17..163 100 -> Plus
3L 15583997..15584095 164..262 100 -> Plus
3L 15584287..15584439 263..415 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:45 Download gff for BS26161.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15576835..15576981 17..163 100 -> Plus
arm_3L 15577097..15577195 164..262 100 -> Plus
arm_3L 15577387..15577539 263..415 100 -> Plus
arm_3L 15577740..15577968 416..644 100 -> Plus
arm_3L 15578023..15578397 645..1019 100   Plus

BS26161.pep Sequence

Translation from 16 to 1020

> BS26161.pep
MYELKTLLPQFDIKLPTCMYPLKNVSLAADSLASGSSTSASTSASTSSCK
LEANRIDRTGRNAATCALDLDSLGRQIQRLLKDDTASVAARQEKVLKQLE
ELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPY
ALLALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPK
ISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPL
CNEIDLVLDICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADV
GVYSSLIRMPAVTEKDLTPALVAWRKRAKLVVQI*

BS26161.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG12304-PA 334 CG12304-PA 1..334 1..334 1710 100 Plus
CG12304-PB 301 CG12304-PB 1..301 1..334 1503 90.1 Plus