Clone BS26184 Report

Search the DGRC for BS26184

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:261
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptOsi19-RB
Protein status:BS26184.pep: full length peptide match
Sequenced Size:806

Clone Sequence Records

BS26184.complete Sequence

806 bp assembled on 2011-08-24

GenBank Submission: KX804597

> BS26184.complete
GAAGTTATCAGTCGACATGGCCAAGTTGCTCCTTGTGATCGTTGGTGTGG
CGGCCCTAGTGGCAGCGGGACAGGCGGCCGGTGGCTCCACCGAAAAGATG
CAGAGGCTTATCGCCGAGGAGCAAAACAAGTGCGCCAGTGGCCAAGACTC
GATGGCCTGCATCAAAGAGCGGGCCATGCGGTTTGTGGACAACGTGATGA
GCAAAGACAGCTTCCAGGTTTCCAACCTGGAAGTCCGCTCCAATGGAGAG
AAGACCACGCCTATCAACGAAGCTCGTGCCAGCAGTGCCGACGGATTTCT
GGACGCCATTGAGAACTATATCCGTGGACACGACGTGAGCATGGACTTGC
CCTTGGCCGATGCCAAGGTCACCGTCTCGGCCCGCAACCTGGTTAACAAT
CAGCTGAGCCTGAACCTCCAGCTGAACGGCGACGATGGCGATGAGGGCAC
CGATGTCGAAGCCAGGGGCAAGAAACACCGTCTCCGCAAGCTGGCCATGC
CCATCCTGGTGCTCATCCTGCTGAAGGCCATCACAGTGATCCCCATGGCC
ATTGGCATCCTGAAGATCAAGGCCTTCAACGCCCTGGCCCTGGGCTTCTT
CTCCTTCATTGTCTCGGTTGGTTTGGCCATTTTCCAATTGTGCAAAAAGA
TTGCTCATGATCACCATCACACCGCCCACATCACCGCCCATGGTCCTTGG
GACGGCCGCACCTTTAGCTCCGTTCCTGCCCCCGTTGTCGAGCAGCCCCA
GAAGTTGGGGCAAGCCCTGGCTTACCAGGCCTACGCTTAGAAGCTTTCTA
GACCAT

BS26184.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:34:47
Subject Length Description Subject Range Query Range Score Percent Strand
Osi19-RB 774 CG15189-PB 1..774 17..790 3870 100 Plus
Osi19-RA 801 CG15189-PA 1..458 17..474 2275 99.8 Plus
Osi19-RA 801 CG15189-PA 477..801 466..790 1625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
Osi19-RB 1111 CG15189-RB 82..856 17..791 3875 100 Plus
Osi19-RA 1138 CG15189-RA 82..539 17..474 2275 99.8 Plus
Osi19-RA 1138 CG15189-RA 558..883 466..791 1630 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:34:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6335920..6336178 216..474 1280 99.6 Plus
3R 32079331 3R 6335443..6335645 17..219 1015 100 Plus
3R 32079331 3R 6336279..6336461 467..649 915 100 Plus
3R 32079331 3R 6336798..6336941 648..791 720 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:34:46 has no hits.

BS26184.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:32 Download gff for BS26184.complete
Subject Subject Range Query Range Percent Splice Strand
Osi19-RB 80..853 17..790 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:04:30 Download gff for BS26184.complete
Subject Subject Range Query Range Percent Splice Strand
Osi19-RB 82..855 17..790 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:22:27 Download gff for BS26184.complete
Subject Subject Range Query Range Percent Splice Strand
Osi19-RB 82..855 17..790 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:22:27 Download gff for BS26184.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6336800..6336940 650..790 100   Plus
3R 6335443..6335643 17..217 100 -> Plus
3R 6335922..6336171 218..467 100 -> Plus
3R 6336280..6336461 468..649 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:04:30 Download gff for BS26184.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2162522..2162662 650..790 100   Plus
arm_3R 2161165..2161365 17..217 100 -> Plus
arm_3R 2161644..2161893 218..467 100 -> Plus
arm_3R 2162002..2162183 468..649 100 -> Plus

BS26184.pep Sequence

Translation from 16 to 789

> BS26184.pep
MAKLLLVIVGVAALVAAGQAAGGSTEKMQRLIAEEQNKCASGQDSMACIK
ERAMRFVDNVMSKDSFQVSNLEVRSNGEKTTPINEARASSADGFLDAIEN
YIRGHDVSMDLPLADAKVTVSARNLVNNQLSLNLQLNGDDGDEGTDVEAR
GKKHRLRKLAMPILVLILLKAITVIPMAIGILKIKAFNALALGFFSFIVS
VGLAIFQLCKKIAHDHHHTAHITAHGPWDGRTFSSVPAPVVEQPQKLGQA
LAYQAYA*

BS26184.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:24:00
Subject Length Description Subject Range Query Range Score Percent Strand
Osi19-PB 257 CG15189-PB 1..257 1..257 1288 100 Plus
Osi19-PA 266 CG15189-PA 1..266 1..257 1268 96.6 Plus
Osi7-PA 288 CG1153-PA 29..243 17..225 199 26.5 Plus
Osi18-PA 306 CG1169-PA 8..227 7..225 178 25.2 Plus