BS26204.complete Sequence
821 bp assembled on 2011-08-25
GenBank Submission: KX805368
> BS26204.complete
GAAGTTATCAGTCGACATGCATACCCTCACGGCGGCCATTGAGATGGACA
AGCTGGATGCCAATCTTGAGCAGCAGTTTGATCTCAATCTCATCGAGGCT
GTCAAGCTGAACCCAGTGATATACGACAGGTCGCACTACAATTACAAGCA
CTTTGTGCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTG
TGCCTGAACAAAAATGTACGAAGCGCTGGAAGAGTCTGCGCGACAAGTTC
GCCCGCGAGATGAAACTATGTCAGGAATCGCGCTGGCGTTACTTCAAGCA
GATGCAATTCCTGGTTGACTCCATCCGCCAGTATCGAGAGTCGCTGCTCG
GCAAGTGCGCCAATGGGAGTCAAAGCGCCAACCAGGTGGCCGATCCGTCG
CAGCAGCAGCAGGCGCAGCAACAGACCGTCGTGGATATATTTGCACAGCC
CTTCAACGGCAGCGCCACAACCTCGGCCCAGGCACTGACCCATCCGCATG
AAATTACTGTCACCAGCGATGCACAGCTGGCCACTGCCGTGGGCAAGGAC
CAAAAGCCATACTTCTACGAGCCGCCGCTCAAGCGAGAGCGCAGTGAGGA
GGAGCACAGCGACAACATGCTCAACACCATCAAGATTTTCCAAAACAACG
TCTCGCAGGCGGTCAGCGCCGAGGACCAGTCGTTCGGCATGGTAGTCACG
GACATGCTCAACACGCTGGGCGTGCGACAAAAGGCAGAGGCGAAGGTGCA
CATCATCAAGTATCTGACGGACATGCAGCTTCTGGCACAGCACAACAAGT
ACTAAAAGCTTTCTAGACCAT
BS26204.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adf1-RC | 789 | CG15845-PC | 1..789 | 17..805 | 3945 | 100 | Plus |
Adf1-RE | 825 | CG15845-PE | 1..762 | 44..805 | 3810 | 100 | Plus |
Adf1-RB | 762 | CG15845-PB | 1..762 | 44..805 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adf1-RC | 1675 | CG15845-RC | 179..967 | 17..805 | 3945 | 100 | Plus |
Adf1-RE | 1668 | CG15845-RE | 173..960 | 18..805 | 3940 | 100 | Plus |
Adf1-RB | 1795 | CG15845-RB | 300..1087 | 18..805 | 3940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:04:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6667072..6667377 | 500..805 | 1530 | 100 | Plus |
2R | 25286936 | 2R | 6666719..6667013 | 206..500 | 1475 | 100 | Plus |
2R | 25286936 | 2R | 6662569..6662757 | 18..206 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:04:46 has no hits.
BS26204.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-25 16:57:37 Download gff for
BS26204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adf1-RC | 180..966 | 17..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:45:57 Download gff for
BS26204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adf1-RC | 179..965 | 17..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:35 Download gff for
BS26204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adf1-RC | 179..965 | 17..803 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:35 Download gff for
BS26204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6667073..6667375 | 501..803 | 100 | | Plus |
2R | 6666720..6667013 | 207..500 | 100 | -> | Plus |
2R | 6662567..6662757 | 17..206 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:45:57 Download gff for
BS26204.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2550072..2550262 | 17..206 | 99 | -> | Plus |
arm_2R | 2554225..2554518 | 207..500 | 100 | -> | Plus |
arm_2R | 2554578..2554880 | 501..803 | 100 | | Plus |
BS26204.pep Sequence
Translation from 16 to 804
> BS26204.pep
MHTLTAAIEMDKLDANLEQQFDLNLIEAVKLNPVIYDRSHYNYKHFVRKA
QTWKQIAETLGVPEQKCTKRWKSLRDKFAREMKLCQESRWRYFKQMQFLV
DSIRQYRESLLGKCANGSQSANQVADPSQQQQAQQQTVVDIFAQPFNGSA
TTSAQALTHPHEITVTSDAQLATAVGKDQKPYFYEPPLKRERSEEEHSDN
MLNTIKIFQNNVSQAVSAEDQSFGMVVTDMLNTLGVRQKAEAKVHIIKYL
TDMQLLAQHNKY*
BS26204.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adf1-PC | 262 | CG15845-PC | 1..262 | 1..262 | 1355 | 100 | Plus |
Adf1-PB | 253 | CG15845-PB | 1..253 | 10..262 | 1311 | 100 | Plus |
Adf1-PA | 253 | CG15845-PA | 1..253 | 10..262 | 1311 | 100 | Plus |
Adf1-PE | 274 | CG15845-PE | 1..253 | 10..262 | 1311 | 100 | Plus |
CG10949-PB | 459 | CG10949-PB | 129..391 | 9..245 | 173 | 25.7 | Plus |