BS26207.complete Sequence
1427 bp assembled on 2011-08-25
GenBank Submission: KX801892
> BS26207.complete
GAAGTTATCAGTCGACATGTTGTACATTGCCGAGGAGAAGAAGAAACTGG
GCAACGACCAATACAAGGCGCAGAACTATCAGAATGCACTCAAGCTCTAC
ACGGATGCCATATCGCTGTGTCCGGACTCGGCGGCATACTATGGCAATCG
GGCCGCCTGCTACATGATGCTGCTCAACTATAATAGCGCCCTGACCGACG
CCCGACACGCCATACGCATCGATCCGGGCTTCGAGAAGGCCTACGTCCGT
GTGGCCAAGTGCTGTCTGGCCCTGGGCGACATTATTGGCACCGAACAGGC
CGTCAAAATGGTCAACGAGCTGAATTCGCTTAGCACGGCTGTTGCTGCCG
AACAGACGGCGGCGCAAAAGTTGCGCCAATTGGAGGCCACCATTCAGGCG
AACTACGATACGAAATCCTATCGCAATGTGGTCTTCTATTTGGATAGTGC
CTTGAAATTGGCGCCCGCCTGTTTGAAATATCGTCTACTCAAGGCTGAGT
GCCTTGCATTTTTGGGGCGATGTGATGAGGCCTTGGACATTGCGGTCAGT
GTAATGAAACTGGATACCACATCGGCGGATGCGATATACGTGAGAGGTCT
GTGCCTGTACTACACGGACAACCTGGACAAGGGAATTCTTCATTTCGAGC
GCGCCCTGACCCTCGACCCGGACCACTACAAGTCCAAGCAGATGCGCAGC
AAATGCAAGCAGCTCAAGGAGATGAAGGAGAACGGCAATATGCTATTCAA
GTCGGGTCGGTATCGCGAGGCACACGTTATCTACACGGACGCCCTGAAGA
TCGATGAACACAACAAGGATATCAATTCGAAATTGCTTTACAATCGGGCT
TTGGTCAACACGCGTATTGGCAATTTGCGAGAGGCCGTGGCCGATTGCAA
TCGAGTGCTGGAGCTGAATAGTCAGTATCTGAAGGCTCTGTTGCTGCGAG
CGCGCTGCTACAATGATCTGGAGAAGTTCGAGGAGTCGGTGGCGGACTAT
GAGACGGCGCTGCAGCTGGAGAAGACGCCGGAGATTAAGCGAATGCTGCG
CGAGGCCAAGTTTGCGTTGAAGAAGTCGAAGCGAAAGGACTACTACAAGA
TCCTGGGCATTGGACGCAATGCGTCCGACGACGAGATCAAGAAGGCGTAT
CGCAAAAAGGCGCTGGTACATCATCCGGATCGACACGCAAACAGCAGTGC
CGAGGAGCGCAAGGAGGAGGAGCTCAAGTTCAAGGAGGTGGGCGAGGCGT
ACGCCATACTGTCGGATGCTCACAAGAAGTCGCGCTACGACAGCGGCCAG
GATATCGAGGAGCAGGAGCAAGCCGACTTCGATCCGAATCAAATGTTCCG
CACATTCTTCCAATTCAACGGCGGTGGCCGGAATAATTCATCGTTCAACT
TTGAGTTCTAGAAGCTTTCTAGACCAT
BS26207.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpr2-RE | 1395 | CG4599-PE | 1..1395 | 17..1411 | 6975 | 100 | Plus |
| Tpr2-RB | 1395 | CG4599-PB | 1..1395 | 17..1411 | 6975 | 100 | Plus |
| Tpr2-RD | 1527 | CG4599-PD | 141..1527 | 25..1411 | 6935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpr2-RE | 2373 | CG4599-RE | 646..2040 | 17..1411 | 6975 | 100 | Plus |
| Tpr2-RB | 2103 | CG4599-RB | 376..1770 | 17..1411 | 6975 | 100 | Plus |
| Tpr2-RD | 2503 | CG4599-RD | 513..1899 | 25..1411 | 6935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:04:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16506008..16506852 | 478..1322 | 4225 | 100 | Plus |
| 2L | 23513712 | 2L | 16505496..16505948 | 25..477 | 2265 | 100 | Plus |
| 2L | 23513712 | 2L | 16506927..16507017 | 1321..1411 | 455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:04:57 has no hits.
BS26207.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-25 17:03:21 Download gff for
BS26207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpr2-RB | 384..1773 | 22..1411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:03 Download gff for
BS26207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpr2-RB | 381..1770 | 22..1411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:39 Download gff for
BS26207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpr2-RB | 381..1770 | 22..1411 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:39 Download gff for
BS26207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16505492..16505948 | 22..477 | 99 | -> | Plus |
| 2L | 16506008..16506852 | 478..1322 | 100 | -> | Plus |
| 2L | 16506929..16507017 | 1323..1411 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:03 Download gff for
BS26207.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16506929..16507017 | 1323..1411 | 100 | | Plus |
| arm_2L | 16505492..16505948 | 22..477 | 99 | -> | Plus |
| arm_2L | 16506008..16506852 | 478..1322 | 100 | -> | Plus |
BS26207.pep Sequence
Translation from 16 to 1410
> BS26207.pep
MLYIAEEKKKLGNDQYKAQNYQNALKLYTDAISLCPDSAAYYGNRAACYM
MLLNYNSALTDARHAIRIDPGFEKAYVRVAKCCLALGDIIGTEQAVKMVN
ELNSLSTAVAAEQTAAQKLRQLEATIQANYDTKSYRNVVFYLDSALKLAP
ACLKYRLLKAECLAFLGRCDEALDIAVSVMKLDTTSADAIYVRGLCLYYT
DNLDKGILHFERALTLDPDHYKSKQMRSKCKQLKEMKENGNMLFKSGRYR
EAHVIYTDALKIDEHNKDINSKLLYNRALVNTRIGNLREAVADCNRVLEL
NSQYLKALLLRARCYNDLEKFEESVADYETALQLEKTPEIKRMLREAKFA
LKKSKRKDYYKILGIGRNASDDEIKKAYRKKALVHHPDRHANSSAEERKE
EELKFKEVGEAYAILSDAHKKSRYDSGQDIEEQEQADFDPNQMFRTFFQF
NGGGRNNSSFNFEF*
BS26207.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpr2-PE | 464 | CG4599-PE | 1..464 | 1..464 | 2389 | 100 | Plus |
| Tpr2-PB | 464 | CG4599-PB | 1..464 | 1..464 | 2389 | 100 | Plus |
| Tpr2-PD | 508 | CG4599-PD | 48..508 | 4..464 | 2373 | 100 | Plus |
| Tpr2-PC | 478 | CG4599-PC | 18..478 | 4..464 | 2373 | 100 | Plus |
| Tpr2-PA | 508 | CG4599-PA | 48..508 | 4..464 | 2373 | 100 | Plus |
