BS26262.complete Sequence
982 bp assembled on 2011-08-24
GenBank Submission: KX800197
> BS26262.complete
GAAGTTATCAGTCGACATGTTAAGCAGGAGGGTCATCGCATTCGCCGCTC
TGGCCCTCATCCAGATAGCCAGCGGTCAGGCCTCGCAATTCAGCAGGGAC
GAAAGTCAGGAGGATCAGAAGACGGAGTTTAACCTGGCCTCCACTCTGAC
GGGAGGCATTACCAGCAGTCGCCATCGCCAGCGGGCCAATCTCAATTCGC
AACTTTATCCTGGCCTTGGTCAGCTGGGATCGGGTTATGCGGGCGCAACT
GGATCCATCGACGATGCCCATGGCCATGAGCAGGGTGGCTCTGGCGTACG
AGTGGCCAGAGGTCACCAGATTCCCGCTTATCCGCCTCCGGGTTTTCCTG
GACAACAGGCTCCAGTTCCGTACCCAGCTGCAGGAGGCTCTTCAGGAGGA
TCCTCATCATCCGGTGGTTACCAAAGTGCAGGTGCTGTTTCTCCTCCTGG
CTATCCTGTTGCTGGAGCAGTTCCTGCTCAGTATCCGGTGGGAGTTCCTC
CCCAGCAGCCAGTGGGTGCAGGAGCACCTGGTTACTTCCCGGGAACTGGT
GCCTATCCTGGCTATCCCTACCCCGGAGTATACTTGCCACAGTACCCAGC
GTACCCTCAACCAGCCCAGTTCCCCGCCTATGGAGTGCTACCCGGAGCTG
TGGCTCAACCAGGAGTTCCTGGAGTAGCTGGAGTTCCGGGAGCACCTGGA
GTGGCAGGAGTGCCCGGAGCAGCTGGTCAGGCTCCTGCCACCAGCGGCAT
GAACTATCATCGCTATCCGGCTCACAATCCCGCTGATCCGAGCCATTGGG
ACCATCATTTCTCGATGAACACCGAGTACAAGGAGGATGGCGTCCACAAG
GGACCATTTGGAGTGCTGAACAATCACAATGCCTTTGGCTATGGCAGTGG
ATATGGGGGCGGATACAACGGTGCCTTCAACTCGCCGGCCTACTGAAAGC
TTTCTAGACCATTCGTTTGGCGCGCGAAAGGG
BS26262.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:53:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ela-RB | 930 | CG7021-PB | 1..930 | 17..946 | 4650 | 100 | Plus |
| Ela-RC | 990 | CG7021-PC | 353..990 | 309..946 | 3190 | 100 | Plus |
| Ela-RA | 990 | CG7021-PA | 353..990 | 309..946 | 3190 | 100 | Plus |
| Ela-RC | 990 | CG7021-PC | 1..293 | 17..309 | 1465 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ela-RB | 1127 | CG7021-RB | 20..951 | 16..947 | 4660 | 100 | Plus |
| Ela-RC | 2135 | CG7021-RC | 373..1011 | 309..947 | 3195 | 100 | Plus |
| Ela-RA | 1187 | CG7021-RA | 373..1011 | 309..947 | 3195 | 100 | Plus |
| Ela-RC | 2135 | CG7021-RC | 20..313 | 16..309 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24866010..24866527 | 430..947 | 2590 | 100 | Plus |
| 3R | 32079331 | 3R | 24865369..24865662 | 16..309 | 1470 | 100 | Plus |
| 3R | 32079331 | 3R | 24865722..24865846 | 309..433 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:53:01 has no hits.
BS26262.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:51 Download gff for
BS26262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ela-RB | 25..960 | 22..959 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:11 Download gff for
BS26262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ela-RB | 26..961 | 22..959 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:41 Download gff for
BS26262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ela-RB | 26..961 | 22..959 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:41 Download gff for
BS26262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24865375..24865661 | 22..308 | 100 | -> | Plus |
| 3R | 24865722..24865844 | 309..431 | 100 | -> | Plus |
| 3R | 24866012..24866537 | 432..959 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:11 Download gff for
BS26262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20691097..20691383 | 22..308 | 100 | -> | Plus |
| arm_3R | 20691444..20691566 | 309..431 | 100 | -> | Plus |
| arm_3R | 20691734..20692259 | 432..959 | 99 | | Plus |
BS26262.pep Sequence
Translation from 16 to 945
> BS26262.pep
MLSRRVIAFAALALIQIASGQASQFSRDESQEDQKTEFNLASTLTGGITS
SRHRQRANLNSQLYPGLGQLGSGYAGATGSIDDAHGHEQGGSGVRVARGH
QIPAYPPPGFPGQQAPVPYPAAGGSSGGSSSSGGYQSAGAVSPPGYPVAG
AVPAQYPVGVPPQQPVGAGAPGYFPGTGAYPGYPYPGVYLPQYPAYPQPA
QFPAYGVLPGAVAQPGVPGVAGVPGAPGVAGVPGAAGQAPATSGMNYHRY
PAHNPADPSHWDHHFSMNTEYKEDGVHKGPFGVLNNHNAFGYGSGYGGGY
NGAFNSPAY*
BS26262.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ela-PB | 309 | CG7021-PB | 1..309 | 1..309 | 1684 | 100 | Plus |
| Ela-PC | 329 | CG7021-PC | 1..329 | 1..309 | 1647 | 93.6 | Plus |
| Ela-PA | 329 | CG7021-PA | 1..329 | 1..309 | 1647 | 93.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 356..548 | 66..250 | 175 | 34.4 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 356..559 | 66..250 | 166 | 33.3 | Plus |
