BS26285.complete Sequence
936 bp assembled on 2011-08-24
GenBank Submission: KX802110
> BS26285.complete
GAAGTTATCAGTCGACATGAAGTTCGTGATTTTGCTGTGCGTGCTGAGCG
CGTTGCTGCTGCAAATTGAAGCGTCGCCCCTCCAGCGGCTTTCGAGAAGC
GAGCGGGCTGTTTCCCGCCAACAGACGGTCAACAATGAGGTGGCTCCGGC
GGTAGCTCCTGCCAGCGATGATGACGATGATGACGACGATGAGGACGACG
ATGATGAGCCTGATCTAGGAGATCTGATCGATGACGATGATGATGATGAT
GAGGAGGAGGACGATGACGAGGACGAGGAGGATGATACGCCCCAGGGTCA
GGCTGCTCCAGCGGCCACTGCCAGCGATGATGACGAAGAGGAAGACGATG
ATGATGACGATTATCTGGACAGGCTGTTCGATGATATCCTGGGCGATGAT
GAAGATGAGGATGATGATGACGAGACACCCGCTGCCACCGCCCAGCAGAG
CGCTGTGGCCGCCGCTCCCGCCCAAACTCTGGATGAGGTCGCCCCCGCTG
CCGCCTCCTCCGTGAGCGCCGGTATCTCCGATGGTGTTGATCTGCCCGCC
GAGTCCGGAAATGCCGCTGAGGTCCTGGCCGCTGGAAATGCTGCCGATGA
GTCCGTTTCCGCTGCCGTTGCTCCGGCGCAAAACGCTGCCGCCAGCAGCA
GCAACAACGAAGGTATCGCCGGTGACGACGACGAGGAGGCCGACGATGAT
GATGACGATGACGACGATGACATTATCGGCGATGACATCATCGAGGCCCG
CCGTGAAGCACGTGAGTCCAAATCGAAGTCGGAAACGGCGACGAAAGAAA
CCAAGGCCAAGAAATCAACAAGTCCCTCAAAGAAGGCCAAGAAAGAGCTG
AAGCATTAAAAGCTTTCTAGACCATTCGTTTGGCGCGCGAAAGGGAGGTG
AAGTGGTCTATAATCTATTAATCAATAAATTCCAAA
BS26285.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:53:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ect-RD | 843 | CG6611-PD | 1..843 | 17..859 | 4215 | 100 | Plus |
| ect-RB | 1746 | CG6611-PB | 1..749 | 17..765 | 3745 | 100 | Plus |
| ect-RA | 1746 | CG6611-PA | 1..749 | 17..765 | 3745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ect-RD | 2426 | CG6611-RD | 189..1033 | 15..859 | 4225 | 100 | Plus |
| ect-RB | 2046 | CG6611-RB | 132..882 | 15..765 | 3755 | 100 | Plus |
| ect-RA | 2103 | CG6611-RA | 189..939 | 15..765 | 3755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10195441..10195710 | 664..395 | 1350 | 100 | Minus |
| 3L | 28110227 | 3L | 10196208..10196435 | 242..15 | 1140 | 100 | Minus |
| 3L | 28110227 | 3L | 10194799..10194997 | 859..661 | 995 | 100 | Minus |
| 3L | 28110227 | 3L | 10195819..10195972 | 395..242 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:53:49 has no hits.
BS26285.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:53 Download gff for
BS26285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ect-RD | 187..1029 | 17..859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:33 Download gff for
BS26285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ect-RD | 191..1033 | 17..859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:02 Download gff for
BS26285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ect-RD | 191..1033 | 17..859 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:02 Download gff for
BS26285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10194804..10194995 | 663..854 | 100 | <- | Minus |
| 3L | 10195443..10195709 | 396..662 | 100 | <- | Minus |
| 3L | 10195819..10195971 | 243..395 | 100 | <- | Minus |
| 3L | 10196208..10196433 | 17..242 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:33 Download gff for
BS26285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10187904..10188095 | 663..854 | 100 | <- | Minus |
| arm_3L | 10188543..10188809 | 396..662 | 100 | <- | Minus |
| arm_3L | 10188919..10189071 | 243..395 | 100 | <- | Minus |
| arm_3L | 10189308..10189533 | 17..242 | 100 | | Minus |
BS26285.pep Sequence
Translation from 16 to 858
> BS26285.pep
MKFVILLCVLSALLLQIEASPLQRLSRSERAVSRQQTVNNEVAPAVAPAS
DDDDDDDDEDDDDEPDLGDLIDDDDDDDEEEDDDEDEEDDTPQGQAAPAA
TASDDDEEEDDDDDDYLDRLFDDILGDDEDEDDDDETPAATAQQSAVAAA
PAQTLDEVAPAAASSVSAGISDGVDLPAESGNAAEVLAAGNAADESVSAA
VAPAQNAAASSSNNEGIAGDDDEEADDDDDDDDDDIIGDDIIEARREARE
SKSKSETATKETKAKKSTSPSKKAKKELKH*
BS26285.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ect-PD | 280 | CG6611-PD | 1..280 | 1..280 | 1407 | 100 | Plus |
| ect-PB | 581 | CG6611-PB | 1..253 | 1..253 | 1263 | 98.8 | Plus |
| ect-PA | 581 | CG6611-PA | 1..253 | 1..253 | 1263 | 98.8 | Plus |
| ect-PF | 589 | CG6611-PF | 1..261 | 1..253 | 1244 | 95.8 | Plus |
| ect-PE | 548 | CG6611-PE | 1..216 | 1..216 | 1084 | 100 | Plus |
