BS26304.complete Sequence
754 bp assembled on 2011-09-14
GenBank Submission: KX804801
> BS26304.complete
GAAGTTATCAGTCGACATGGAATTCAATTACCTTGCTGATTCCGCACTTT
CCACTTTAGTGGAAAACAAAAAGTTCTTCAAGGAAATGTCAGATTTCGTG
TCCGATTTCAGCGATGGCGGGAAGATCAAGAAGTTGCTCGAGCAGAGCGT
TGAGCAGAGCGTGGAGCACGCCGTGAATGTAGTCCATATGAAGATAAAGC
ACCAATCGCTCAACAAGGCTATGAATCAGGTCAAAAACTCTAGCGCCACC
ATCGAGGAGTTCGAGGAAGTCTGGAAGGAACGCTCCAAAGCGGTGGAGCA
GAAGCGCATCAATGTCAAGAATCTACACGAGTTCAAGAACTTCGTAAAAG
CAGTTGAATCAGCAGCTGGTCAGGCGGGTGCGGAAGTCAATGATCAAGCG
AATGGCACCGCCTATGATGAGGACCTTATTATGGAAGACTCCGGCAGCGA
GGTCTTCTCGTTCTACGATCCCTGGTCCAAGGCCCTGATAAAGAACCCCA
TGCGCAACAAAATGTGCGGTCACATCTACGACCGCGACTCGGTGATGCCG
ATCATAATGGACCGCATTGGCATCCGATGCCCGGTGCTCGGCTGCGCCAA
CTTGTGCTACATCCAGCCAGATCACCTGGTCCAGGACGCCAATGTCCAGC
AAAAGATACAACAGAGCATGTCTAACGCGATCGTGGATGTAACTGCCTCG
GAGGAGGACGAGGAATAGAAGCTTTCTAGACCATTCGTTTGGCGCGCGAA
AGGG
BS26304.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:29:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| qjt-RB | 702 | CG13732-PB | 1..702 | 17..718 | 3510 | 100 | Plus |
| qjt-RA | 702 | CG13732-PA | 1..702 | 17..718 | 3510 | 100 | Plus |
| cerv-RD | 693 | CG15645-PD | 1..678 | 17..715 | 1550 | 82.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:29:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| qjt-RB | 834 | CG13732-RB | 55..758 | 17..720 | 3520 | 100 | Plus |
| qjt-RA | 990 | CG13732-RA | 211..914 | 17..720 | 3520 | 100 | Plus |
| cerv-RD | 1141 | CG15645-RD | 283..960 | 17..715 | 1550 | 82.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:29:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17479362..17480065 | 17..720 | 3520 | 100 | Plus |
| X | 23542271 | X | 15577167..15577718 | 715..155 | 1360 | 83.2 | Minus |
| X | 23542271 | X | 15575060..15575354 | 709..415 | 605 | 80.3 | Minus |
| X | 23542271 | X | 15555366..15555660 | 709..415 | 560 | 79.3 | Minus |
| X | 23542271 | X | 15575375..15575510 | 367..232 | 275 | 80.1 | Minus |
| X | 23542271 | X | 15555727..15555813 | 318..232 | 270 | 87.4 | Minus |
| X | 23542271 | X | 15577813..15577889 | 93..17 | 235 | 87 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:29:36 has no hits.
BS26304.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:38 Download gff for
BS26304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qjt-RA | 114..815 | 17..718 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:16:27 Download gff for
BS26304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qjt-RA | 211..914 | 17..720 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:48 Download gff for
BS26304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qjt-RA | 211..914 | 17..720 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:48 Download gff for
BS26304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17479362..17480065 | 17..720 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:16:27 Download gff for
BS26304.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17472462..17473165 | 17..720 | 100 | | Plus |
BS26304.pep Sequence
Translation from 16 to 717
> BS26304.pep
MEFNYLADSALSTLVENKKFFKEMSDFVSDFSDGGKIKKLLEQSVEQSVE
HAVNVVHMKIKHQSLNKAMNQVKNSSATIEEFEEVWKERSKAVEQKRINV
KNLHEFKNFVKAVESAAGQAGAEVNDQANGTAYDEDLIMEDSGSEVFSFY
DPWSKALIKNPMRNKMCGHIYDRDSVMPIIMDRIGIRCPVLGCANLCYIQ
PDHLVQDANVQQKIQQSMSNAIVDVTASEEDEE*
BS26304.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| qjt-PB | 233 | CG13732-PB | 1..233 | 1..233 | 1197 | 100 | Plus |
| qjt-PA | 233 | CG13732-PA | 1..233 | 1..233 | 1197 | 100 | Plus |
| cerv-PD | 230 | CG15645-PD | 1..226 | 1..233 | 805 | 69.1 | Plus |
| cerv-PA | 230 | CG15645-PA | 1..226 | 1..233 | 805 | 69.1 | Plus |
| cerv-PC | 177 | CG15645-PC | 1..173 | 58..233 | 645 | 72.7 | Plus |
