BS26306.complete Sequence
1070 bp assembled on 2011-08-24
GenBank Submission: KX805678
> BS26306.complete
GAAGTTATCAGTCGACATGGCGGAAAGCGCTTATACCGATGCGCCGTACC
TCAACCGCGTACCGACAGTTGGTGTGATGTGCATCGATATCGCCACGCAA
CTGCAGCAGAACTTTAGTGGTGCATATCACAGCTATTTGGCTGCATCCTA
TGTCAAATTTTTGGAGGCATCCGGTGCGCATGTGGTTCCCATTTGGATCG
GCCGAGAACGAGCTTACTATGCGTTGATGATGAGCCAGTTAAATGGCATT
CTTCTGCCAGGTGGAGCCGTGTTCATCGACGAGGCTGATAGGCAAGCCAA
TCCGGATGTGACCAGCGATTGCGTCCGGAGTGCCGAGCTCATCTACCAAT
TGGCTATGGAGCGTAATATGCGGGCGAAGAAGTTGGATGATCGTGGCGCA
TACTTTCCCGTTTGGGGAACTTGTCTTGGCTTCCAGTTGATCCTTATTCA
CGCTGCCGAAGCACCGAATGTTCGAATCGCCTGTCAGCCCATGAGGGAGG
CGATGCCAGTTACTCTGACCGATGACTATCAACAATCACAACTGCTTGGA
AGTCTGCCGAAATCGGTTGCCGATGAGATGGAGAAGCACCCATTTGCCTG
CCATCAGCATCGGTATTGCATCACTAAAGAGAGTTTGGAATCCTATGGTC
TAGCTAAGGATTGGCATCCCCTGGCCACTCAGAAGGACACTTCAGGACTG
GAATTCATCACGATTGTCGAGCACAGGCGTTTTCCCATCTTTGGATGTCA
GTTTCATCCTGAGCGCGCTGCATTTGAGCAGCTTTTCAACTCACCGGACA
AATGTTACATGGCGCATTCTCGCATGGGTATCGATTTGTCCCAAATCTTT
GGCAGTCGGTTTGTTGACTTCTGCCGCCGCAACAACAATCAGTTCGAAAG
TGACAAATTAAAAACCAGACATCTCATTTGGAACTGGCAGCCCGTTTTCT
CTGGCAAGTTCAAGGGCTCCAACTGGCAGCAGTGCTATCTATTTGAGAAG
AACGTGGACTATTCGGAAGAGCCGGATGATTCTGAGGAGCTTCGCTCATC
TTAAAAGCTTTCTAGACCAT
BS26306.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:55:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(3)72Dr-RA | 1038 | CG32154-PA | 1..1038 | 17..1054 | 5190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(3)72Dr-RA | 1138 | CG32154-RA | 36..1073 | 17..1054 | 5190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16238538..16239397 | 195..1054 | 4300 | 100 | Plus |
| 3L | 28110227 | 3L | 16237758..16237937 | 17..196 | 900 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:55:44 has no hits.
BS26306.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:56 Download gff for
BS26306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32154-RA | 1..1036 | 17..1052 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:23 Download gff for
BS26306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)72Dr-RA | 36..1071 | 17..1052 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:50 Download gff for
BS26306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)72Dr-RA | 36..1071 | 17..1052 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:50 Download gff for
BS26306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16237758..16237936 | 17..195 | 100 | -> | Plus |
| 3L | 16238539..16239395 | 196..1052 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:23 Download gff for
BS26306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16230858..16231036 | 17..195 | 100 | -> | Plus |
| arm_3L | 16231639..16232495 | 196..1052 | 100 | | Plus |
BS26306.pep Sequence
Translation from 16 to 1053
> BS26306.pep
MAESAYTDAPYLNRVPTVGVMCIDIATQLQQNFSGAYHSYLAASYVKFLE
ASGAHVVPIWIGRERAYYALMMSQLNGILLPGGAVFIDEADRQANPDVTS
DCVRSAELIYQLAMERNMRAKKLDDRGAYFPVWGTCLGFQLILIHAAEAP
NVRIACQPMREAMPVTLTDDYQQSQLLGSLPKSVADEMEKHPFACHQHRY
CITKESLESYGLAKDWHPLATQKDTSGLEFITIVEHRRFPIFGCQFHPER
AAFEQLFNSPDKCYMAHSRMGIDLSQIFGSRFVDFCRRNNNQFESDKLKT
RHLIWNWQPVFSGKFKGSNWQQCYLFEKNVDYSEEPDDSEELRSS*
BS26306.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(3)72Dr-PA | 345 | CG32154-PA | 1..345 | 1..345 | 1851 | 100 | Plus |
| l(3)72Dp-PA | 373 | CG32155-PA | 26..331 | 16..341 | 516 | 34.7 | Plus |
