BS26308.complete Sequence
650 bp assembled on 2011-08-24
GenBank Submission: KX802664
> BS26308.complete
GAAGTTATCAGTCGACATGGACCGGCAACAAGTTACACTGCTGAATATCC
TTATATCCCTAACATTGCAAATAATAAGCCCTTCATTTGCATTAAATCAC
TTTTTTATTCCTGAAAGGGAAGAGCTGTTTAGTGAGTGCCTCGACAAGCC
AGGATTTTCTTACGTGAATGAGTTGGCTGATCTTTCCCGATTTAACCGTA
AAAAAGATGCAGATGGGGCCATGAATATATCTGGAAACATAACCATGTTA
TGGGACGTCGAACCTTCAAATCGCGTCGCGGTTGAAGTAAACATAGAAAA
ATTTGAAGGAGGTACTTGGAATCCAACATTATTCAAAGGAGGTGATAAGG
ATTTCTGCAAGAACTTCTATGATAAGAACACCATTTATTATCCTTTCTCG
ACAAAACACGTAATCAACAAGCAGCAAGTTAAGGACAAATGCATTACAAC
TCCGGGAACAGTTTTAGTCCTGGAACCATTTATCCTGAAGATATTAATCA
ATTTCGCAGTGCCTCTAAGCCCAGGAATTCACAAGGCTGTCATTATATTT
TCTGCATTCGACAAATCTGGTGTTAAGCGTCCACGGGACACTTGCATTGA
AATTGTTGGCGAAATAGTGAATATCTGAAAGCTTTCTAGACCATTCGTGG
BS26308.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:55:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheB93b-RA | 612 | CG31438-PA | 1..612 | 17..628 | 3060 | 100 | Plus |
| CheB93a-RA | 603 | CG15503-PA | 199..597 | 224..622 | 345 | 72.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheB93b-RA | 680 | CG31438-RA | 3..616 | 15..628 | 3070 | 100 | Plus |
| CheB93a-RA | 751 | CG15503-RA | 206..604 | 224..622 | 345 | 72.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21409125..21409392 | 15..282 | 1340 | 100 | Plus |
| 3R | 32079331 | 3R | 21409452..21409629 | 280..457 | 890 | 100 | Plus |
| 3R | 32079331 | 3R | 21409690..21409860 | 458..628 | 855 | 100 | Plus |
| 3R | 32079331 | 3R | 21407787..21407942 | 302..457 | 240 | 76.9 | Plus |
Blast to na_te.dros performed 2014-11-26 16:55:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 5962..5993 | 92..61 | 106 | 81.2 | Minus |
BS26308.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:56 Download gff for
BS26308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheB93b-RA | 1..612 | 17..628 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:28 Download gff for
BS26308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheB93b-RA | 5..618 | 17..634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:57 Download gff for
BS26308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheB93b-RA | 5..618 | 17..634 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:57 Download gff for
BS26308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21409453..21409629 | 281..457 | 100 | -> | Plus |
| 3R | 21409690..21409862 | 458..634 | 97 | | Plus |
| 3R | 21409127..21409390 | 17..280 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:28 Download gff for
BS26308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17234849..17235112 | 17..280 | 100 | -> | Plus |
| arm_3R | 17235175..17235351 | 281..457 | 100 | -> | Plus |
| arm_3R | 17235412..17235584 | 458..634 | 97 | | Plus |
BS26308.pep Sequence
Translation from 16 to 627
> BS26308.pep
MDRQQVTLLNILISLTLQIISPSFALNHFFIPEREELFSECLDKPGFSYV
NELADLSRFNRKKDADGAMNISGNITMLWDVEPSNRVAVEVNIEKFEGGT
WNPTLFKGGDKDFCKNFYDKNTIYYPFSTKHVINKQQVKDKCITTPGTVL
VLEPFILKILINFAVPLSPGIHKAVIIFSAFDKSGVKRPRDTCIEIVGEI
VNI*
BS26308.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheB93b-PA | 203 | CG31438-PA | 1..203 | 1..203 | 1061 | 100 | Plus |
| CheB93a-PA | 200 | CG15503-PA | 16..199 | 18..202 | 604 | 58.4 | Plus |
| CheB42b-PA | 196 | CG33351-PA | 2..191 | 11..199 | 345 | 36.6 | Plus |
| CheB98a-PB | 197 | CG14531-PB | 29..195 | 35..203 | 344 | 40 | Plus |
| CheB38a-PA | 197 | CG33320-PA | 11..196 | 19..203 | 338 | 36.9 | Plus |
