BS26312.complete Sequence
578 bp assembled on 2011-08-24
GenBank Submission: KX803133
> BS26312.complete
GAAGTTATCAGTCGACATGATCAAAATGGACCCGAAATCCCACCAAAAGC
TCTTCAAGGAAATGGCAGAAGTCGTGTCCAATTCCAGCGATGACGGGGAG
AAGTTGCTAACCAAAAACTCTAGCAACACCATCGAGAAGTCCGAGGAAGT
CTGCAAGGAGCGCCCCGAAGCTGTGGAGCAGATGCGCATCGATGTCAATA
ACTCACTTGAGGACACGAACATGAATGCGGTGGAATCAGAAGCTCAAAAG
AATATCGCCGGCCTTGATGAGGACCTTATCATGGAAGACTTCGGCGTCGA
GGTCGTCCCGTTCCACGATCCCTGGTCCAAGCTATTGATAAAGCACCCCG
TGCGCAACAAAAGGTGCGGCCATATCTACGACCGCGAAACGGTTTTAATG
ATCATCAAGGACAACATTGGCATCCTATGCCCGGTGCGCGACTGTCCCAA
CTTGTCCGACATCAAGTTAGAGCACCTGGTCAAGGACCCCGACGTGGAGC
AGGAGTTGCAAAAGCGCAAGTCCGACAAGATCCAGAATGAAACTTCCTCG
GATGAGGACTAAAAGCTTTCTAGACCAT
BS26312.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42300-RA | 546 | CG42300-PA | 1..546 | 17..562 | 2730 | 100 | Plus |
| CG42299-RA | 549 | CG42299-PA | 1..549 | 17..562 | 2590 | 98.5 | Plus |
| cerv-RD | 693 | CG15645-PD | 363..672 | 250..559 | 740 | 82.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42300-RA | 726 | CG42300-RA | 71..616 | 17..562 | 2730 | 100 | Plus |
| CG42299-RA | 679 | CG42299-RA | 21..569 | 17..562 | 2590 | 98.5 | Plus |
| cerv-RD | 1141 | CG15645-RD | 645..954 | 250..559 | 740 | 82.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15555363..15555855 | 562..70 | 2465 | 100 | Minus |
| X | 23542271 | X | 15575057..15575552 | 562..70 | 2340 | 98.6 | Minus |
| X | 23542271 | X | 15577173..15577482 | 559..250 | 740 | 82.6 | Minus |
| 3L | 28110227 | 3L | 17479760..17480054 | 265..559 | 560 | 79.3 | Plus |
| X | 23542271 | X | 15577548..15577642 | 205..111 | 385 | 93.7 | Minus |
| X | 23542271 | X | 15555921..15555975 | 71..17 | 275 | 100 | Minus |
| 3L | 28110227 | 3L | 17479577..17479663 | 112..198 | 270 | 87.4 | Plus |
| X | 23542271 | X | 15575609..15575663 | 71..17 | 260 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:54:40 has no hits.
BS26312.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:54 Download gff for
BS26312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42300-RA | 37..580 | 17..560 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:54 Download gff for
BS26312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42300-RA | 71..614 | 17..560 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:24 Download gff for
BS26312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42300-RA | 71..614 | 17..560 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:24 Download gff for
BS26312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15555365..15555853 | 72..560 | 100 | <- | Minus |
| X | 15555921..15555975 | 17..71 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:54 Download gff for
BS26312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15449398..15449886 | 72..560 | 100 | <- | Minus |
| arm_X | 15449954..15450008 | 17..71 | 100 | | Minus |
BS26312.pep Sequence
Translation from 16 to 561
> BS26312.pep
MIKMDPKSHQKLFKEMAEVVSNSSDDGEKLLTKNSSNTIEKSEEVCKERP
EAVEQMRIDVNNSLEDTNMNAVESEAQKNIAGLDEDLIMEDFGVEVVPFH
DPWSKLLIKHPVRNKRCGHIYDRETVLMIIKDNIGILCPVRDCPNLSDIK
LEHLVKDPDVEQELQKRKSDKIQNETSSDED*
BS26312.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42300-PA | 181 | CG42300-PA | 1..181 | 1..181 | 938 | 100 | Plus |
| CG42299-PA | 182 | CG32584-PA | 1..182 | 1..181 | 919 | 98.4 | Plus |
| cerv-PD | 230 | CG15645-PD | 17..224 | 9..181 | 485 | 54.3 | Plus |
| cerv-PA | 230 | CG15645-PA | 17..224 | 9..181 | 485 | 54.3 | Plus |
| cerv-PC | 177 | CG15645-PC | 16..171 | 33..181 | 458 | 61.5 | Plus |
