Clone BS26323 Report

Search the DGRC for BS26323

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:263
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptCG42847-RA
Protein status:BS26323.pep: full length peptide match
Sequenced Size:458

Clone Sequence Records

BS26323.complete Sequence

458 bp assembled on 2011-08-24

GenBank Submission: KX805870

> BS26323.complete
GAAGTTATCAGTCGACATGTCGAATTATAGGGTTACATATAAAAATCGAT
GCATTAGCTGTGGCGTCGAAGTACCAGTCCTTTCCACAAATGGATGCCAT
TTCAAAGTTCAGGACAAATTTAATTCTTGTGGCTCCAAAATAAGCAATCC
TCGAAAACGGCCGAGTCAAATAAAAAGGCACAGGAATATTTCTCAAAGAA
AGCTAAATAATGGTTTTAAATGGTCTTCATCATCTACGAAAAAACGATTC
TATCCGTTAGTAAAGAAACAAAAATTGTTGATGTCCTCAGAGCCCTCTCA
TAAGGCTCTAATTTTAAGAGAGATGATTAGGTTAGGAAGAAAACCGAATC
GAAAGTTCGAAAAGGCTGCGAGAAATAGTGTATTTCCGGGCATCTGCCGT
ACGATATTGAAACTGCACCAGTATACTAATCTTGTACAGTAGAAGCTTTC
TAGACCAT

BS26323.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:56:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG42847-RA 426 CG42847-PA 1..426 17..442 2130 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG42847-RA 817 CG42847-RA 153..580 16..443 2140 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9428022..9428396 16..390 1875 100 Plus
2L 23513712 2L 9428449..9428503 389..443 275 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:56:48 has no hits.

BS26323.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:39:58 Download gff for BS26323.complete
Subject Subject Range Query Range Percent Splice Strand
CG42847-RA 112..537 17..442 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:47 Download gff for BS26323.complete
Subject Subject Range Query Range Percent Splice Strand
CG42847-RA 154..579 17..442 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:17 Download gff for BS26323.complete
Subject Subject Range Query Range Percent Splice Strand
CG42847-RA 154..579 17..442 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:31:17 Download gff for BS26323.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9428023..9428395 17..389 100 -> Plus
2L 9428450..9428502 390..442 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:47 Download gff for BS26323.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9428023..9428395 17..389 100 -> Plus
arm_2L 9428450..9428502 390..442 100   Plus

BS26323.pep Sequence

Translation from 16 to 441

> BS26323.pep
MSNYRVTYKNRCISCGVEVPVLSTNGCHFKVQDKFNSCGSKISNPRKRPS
QIKRHRNISQRKLNNGFKWSSSSTKKRFYPLVKKQKLLMSSEPSHKALIL
REMIRLGRKPNRKFEKAARNSVFPGICRTILKLHQYTNLVQ*

BS26323.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG42847-PA 141 CG42847-PA 1..141 1..141 743 100 Plus