BS26329.complete Sequence
398 bp assembled on 2011-08-24
GenBank Submission: KX804465
> BS26329.complete
GAAGTTATCAGTCGACATGCAGCTGAGTATTATAGTATTGCTCTTGTGCT
CGGTGGTTGTTGCAAATTCACTTGCCCCAAGTCAACTGGCATCGAAAACC
CCATCACCCAATGTAAGCAAGGATCAGCCGTCATCCAGGGAGGAGAAACC
CAGTTTGAAACCGTGCAAACCCATCGAGACTGTGAGTTCAGAGCCAAAAG
GACTAGGCAATACTCCTAAAGTCGGTTCAATTACTCCGGAATCAGCTAAA
ACGTCTGGCACAACCGTGGATAAAAGTCTGGATGATTGCGAACCCATTCC
CGAGGGTATTGGATCTCGATTGAATGCGAGAACTCTTCAAACACTGGTTA
TAAAAAATAATAATAACCCTCTTTTTAATTGAAAGCTTTCTAGACCAT
BS26329.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:34:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43093-RA | 366 | CG43093-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:34:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43093-RA | 476 | CG43093-RA | 4..369 | 17..382 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:34:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22769882..22770235 | 382..29 | 1770 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 21:34:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 5929..5965 | 329..365 | 113 | 78.4 | Plus |
invader6 | 4885 | invader6 INVADER6 4885bp | 4388..4429 | 353..394 | 102 | 71.4 | Plus |
BS26329.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:04 Download gff for
BS26329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43093-RA | 4..368 | 17..381 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:30:40 Download gff for
BS26329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43093-RA | 4..368 | 17..381 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:36:54 Download gff for
BS26329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43093-RA | 4..368 | 17..381 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:36:54 Download gff for
BS26329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22769883..22770235 | 29..381 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:30:40 Download gff for
BS26329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18595605..18595957 | 29..381 | 100 | <- | Minus |
BS26329.pep Sequence
Translation from 16 to 381
> BS26329.pep
MQLSIIVLLLCSVVVANSLAPSQLASKTPSPNVSKDQPSSREEKPSLKPC
KPIETVSSEPKGLGNTPKVGSITPESAKTSGTTVDKSLDDCEPIPEGIGS
RLNARTLQTLVIKNNNNPLFN*
BS26329.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43093-PA | 121 | CG43093-PA | 1..121 | 1..121 | 612 | 100 | Plus |