BS26330.complete Sequence
653 bp assembled on 2011-08-24
GenBank Submission: KX805300
> BS26330.complete
GAAGTTATCAGTCGACATGCCAGTGAAAAAGCAAGAAGCTCATCGGGCTC
TCGAGCTGCTCGAGGACTACCACGCGAGACTTTCGGAGCCGCAGGATCGG
GCGCTGCGTATTGCAATCGAACGCGTTATACGCATATTTAAATCTCGCTT
GTTTCAAGCGCTGTTAGATATACAAGAATTCTATGAATTGACATTATTGG
ATGACTCGAAGAGCATACAACAAAAGACAGCGGAGACCTTGCAAATTGCA
ACCAAATGGGAAAAGGATGGCCAGGCAGTCAAAATAGCTGATAATCAGCG
CATGCGCATCGAATCGGACACGGAAAATGCCAAGGAGCCAACTGTCGAGC
AGCAGCAAAAGCAGCAGCAAGCGCAGCAGCGCAGTTCCCGCTCCCCGCAG
CAGCAGAATCCGCAGCAGCAGCAGGGATCCAAATCGAGGAGCGGGTCCCA
GACTATACAGATACAGTCACTTACACAGACATACCCAAACGCACACCAGC
GCAAGCGAGTCCTCGTGAGCCTCCATCCACATCAACATCAACATCAAAGC
CAAATTCAACACCAACACCATTACCAACTTCGCCATAACAACGGCATTCA
AGCCAAAATGCTTAAGCGCGCTTTTGAGTCCACCTAGAAGCTTTCTAGAC
CAT
BS26330.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:35:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dlg1-RO | 621 | CG1725-PO | 1..621 | 17..637 | 3105 | 100 | Plus |
| dlg1-RI | 627 | CG1725-PI | 1..627 | 17..637 | 3010 | 99 | Plus |
| dlg1-RJ | 627 | CG1725-PJ | 1..627 | 17..637 | 3010 | 99 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:35:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dlg1-RO | 2363 | CG1725-RO | 626..1246 | 17..637 | 3105 | 100 | Plus |
| dlg1-RI | 2114 | CG1725-RI | 371..997 | 17..637 | 3010 | 99 | Plus |
| dlg1-RJ | 2102 | CG1725-RJ | 359..985 | 17..637 | 3010 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:35:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11387992..11388174 | 455..637 | 915 | 100 | Plus |
| X | 23542271 | X | 11387772..11387933 | 293..454 | 810 | 100 | Plus |
| X | 23542271 | X | 11376840..11376973 | 34..167 | 670 | 100 | Plus |
| X | 23542271 | X | 11381854..11381980 | 166..292 | 635 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 21:35:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2538 | 348..578 | 237 | 60 | Plus |
| Doc3-element | 4740 | Doc3-element DOC3 4740bp | 549..634 | 524..608 | 130 | 62.8 | Plus |
| rover | 7318 | rover ROVER 7318bp | 1930..1997 | 539..606 | 123 | 68.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 2371..2410 | 447..489 | 107 | 81.4 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 1615..1654 | 447..489 | 107 | 81.4 | Plus |
BS26330.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:05 Download gff for
BS26330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlg1-RO | 598..1218 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:31:05 Download gff for
BS26330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlg1-RO | 626..1246 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:37:21 Download gff for
BS26330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlg1-RO | 626..1246 | 17..637 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:37:21 Download gff for
BS26330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11387772..11387933 | 293..454 | 100 | -> | Plus |
| X | 11387992..11388174 | 455..637 | 100 | | Plus |
| X | 11374492..11374510 | 17..35 | 100 | -> | Plus |
| X | 11376842..11376973 | 36..167 | 100 | -> | Plus |
| X | 11381856..11381980 | 168..292 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:31:05 Download gff for
BS26330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11268525..11268543 | 17..35 | 100 | -> | Plus |
| arm_X | 11270875..11271006 | 36..167 | 100 | -> | Plus |
| arm_X | 11275889..11276013 | 168..292 | 100 | -> | Plus |
| arm_X | 11281805..11281966 | 293..454 | 100 | -> | Plus |
| arm_X | 11282025..11282207 | 455..637 | 100 | | Plus |
BS26330.pep Sequence
Translation from 16 to 636
> BS26330.pep
MPVKKQEAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALL
DIQEFYELTLLDDSKSIQQKTAETLQIATKWEKDGQAVKIADNQRMRIES
DTENAKEPTVEQQQKQQQAQQRSSRSPQQQNPQQQQGSKSRSGSQTIQIQ
SLTQTYPNAHQRKRVLVSLHPHQHQHQSQIQHQHHYQLRHNNGIQAKMLK
RAFEST*
BS26330.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dlg1-PO | 206 | CG1725-PO | 1..206 | 1..206 | 1046 | 100 | Plus |
| dlg1-PI | 208 | CG1725-PI | 1..208 | 1..206 | 1033 | 99 | Plus |
| dlg1-PJ | 208 | CG1725-PJ | 1..208 | 1..206 | 1033 | 99 | Plus |
| dlg1-PC | 208 | CG1725-PC | 1..208 | 1..206 | 1033 | 99 | Plus |
| dlg1-PU | 198 | CG1725-PU | 1..198 | 1..206 | 991 | 96.1 | Plus |
