BS26332.complete Sequence
899 bp assembled on 2011-08-24
GenBank Submission: KX805644
> BS26332.complete
GAAGTTATCAGTCGACATGAATAAAATGGAAGAAAACTTCTACAATGGAT
GCACTTGTTGCCATTGCTCTTGCCGCCGCTCTTGCTCTTGCTCGTCTTTA
AAACGATGCAATTCCGCTGAATCGTGTCGCTTACTTATTCAGAAAAGTTC
GAAATATATATACGATGGCGTTAGATGCTCAGATCTCAGATGTCCATACT
GCAACGAAGCGCTTGGACAGAAAATCCTTTTATCGCACTCGGCGGAGTCC
ACTGCTCGAACGCCACAACAAACGCGGATTTCCGACATACAGTTTAGTCA
TTCGGATAAAGGACGAAAAAGTTACAGTAAAATGAAATCGATGTCCGGAT
TTGAAGAGCCTAAAGATCAAGTTCAATATAAGAAGAGAGAGTCTAGCATA
TCAACACCATTCAGTTGCTATAGGGAGGATTCGCCAAGGTCCTCGTCCAG
AGTTAAGTCTACCGGAAAGTACAGTTGCAACTGCTTCACAAAGGAACAGC
CAAGAAAGTATGTTTCAAAGACTGCCGAAGAAATCAGAAGGACGGTTCGA
GCGGAGATTGCAGAGATGGAGCAAAAGCAGGCAATGGCAGACAAAAATGG
ATGTGATTTTACTTTTTGCAAGCCACCGCAGAGTGGACGATTGTCATCTA
ATGAAGAAACCAAGAGTAAATCTAAAGATGAAGAGATTTTTACGGAGTCC
GAGAAATTGATACTTAGCAAAATTGATTGGCGTACTACTGCCACCAATGA
TTTGTCTAATTCCGAGGTAATTTATTCGACGATAAAGCGCTTGCTGCGCG
TATGTCTGAACAACAAGATAATCGAACTTGGGCTCCTGGATAGTCTGCAT
GATGCGATAGCACAATTCAAACGAGACAACTAAAAGCTTTCTAGACCAT
BS26332.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:36:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43077-RA | 867 | CG43077-PA | 1..867 | 17..883 | 4335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:36:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43077-RA | 1000 | CG43077-RA | 67..933 | 17..883 | 4335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:36:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17067371..17067977 | 883..277 | 3035 | 100 | Minus |
| X | 23542271 | X | 17068131..17068304 | 277..104 | 870 | 100 | Minus |
| X | 23542271 | X | 17068371..17068457 | 103..17 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:36:03 has no hits.
BS26332.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:05 Download gff for
BS26332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43077-RA | 67..931 | 17..881 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:31:15 Download gff for
BS26332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43077-RA | 67..931 | 17..881 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:37:32 Download gff for
BS26332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43077-RA | 67..931 | 17..881 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:37:32 Download gff for
BS26332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17068371..17068457 | 17..103 | 100 | | Minus |
| X | 17067373..17067976 | 278..881 | 100 | <- | Minus |
| X | 17068131..17068304 | 104..277 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:31:15 Download gff for
BS26332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16961406..16962009 | 278..881 | 100 | <- | Minus |
| arm_X | 16962164..16962337 | 104..277 | 100 | <- | Minus |
| arm_X | 16962404..16962490 | 17..103 | 100 | | Minus |
BS26332.pep Sequence
Translation from 16 to 882
> BS26332.pep
MNKMEENFYNGCTCCHCSCRRSCSCSSLKRCNSAESCRLLIQKSSKYIYD
GVRCSDLRCPYCNEALGQKILLSHSAESTARTPQQTRISDIQFSHSDKGR
KSYSKMKSMSGFEEPKDQVQYKKRESSISTPFSCYREDSPRSSSRVKSTG
KYSCNCFTKEQPRKYVSKTAEEIRRTVRAEIAEMEQKQAMADKNGCDFTF
CKPPQSGRLSSNEETKSKSKDEEIFTESEKLILSKIDWRTTATNDLSNSE
VIYSTIKRLLRVCLNNKIIELGLLDSLHDAIAQFKRDN*
BS26332.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43077-PA | 288 | CG43077-PA | 1..288 | 1..288 | 1516 | 100 | Plus |
