Clone BS26335 Report

Search the DGRC for BS26335

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:263
Well:35
Vector:pDNR-Dual
Associated Gene/TranscriptCG32834-RB
Protein status:BS26335.pep: gold
Sequenced Size:1703

Clone Sequence Records

BS26335.complete Sequence

1703 bp assembled on 2011-09-19

GenBank Submission: KX805608

> BS26335.complete
GAAGTTATCAGTCGACATGATTTGGAGTGTGTTCTTATTTCTGTTGGCTG
CTCTTTTACGGCCGGTTCGTGGTGATCTGGATGCCCAAAGCCGCATCATT
GGAGGTTATGATGTGGATATTGAAGATGCCCCGTACCAGGCGGAAGTAAT
AATAGATGGCACAGCAATATGCAGTGGGGCGATCATCACATCAGACACCA
TCATCACAGCAGCTTCGTGTGTCCAGTCCTACGGTTCAATTGAAGTACGC
GTGGGCACCAGTTCCCGCGATTATGATGGAACTGGATTCCTGCTCGAAGT
CTGTGAAATAATTAATCACCCGCAGTACAATTGCTGGCGTTTCGATAACA
ATCTGGCACTGTTGAAGTTGTGCGATCCGCTCAAGACCTCCGAAGCTATT
CAGCCCATCAGCATAGCAGAGGATGAACCGGACGATGGTTCGTGGTGCAC
TGTCTCCGGCTGGGGATCCACCAGTTGGTGGGGCAGCTGGTGGGACAGGT
GCTTCGGCAGTCTGCCGGACTATCTGCAGATGGCATGGGTCAGCGTCTAC
AATCGGGAGCAGTGCGCCGCGGATCGCGGTGTTTGGTTCGGACTCTGGGA
CAATGGCATCTCGTACCTTACCCTCTGCACTCATAATGGCGCCGGAGGAT
GCTCCTACGATACGGGAGCTCCCTTGGTGATAGATGGACAACTCGTGGGC
ATTCTATCCGAAGGCGGCTGCACCACCAAACCAGATGTCTACGCCAATGT
ACCTTGGTTCACAGGTTGGATTGCCGAGAACACCGAAGATGAGGATACAA
CCGCTTCGACAAGTACTTCTAGTGATAGTAGTACCACTGTGGCTAGCACT
ACAACTGCTACTGTACCGAGCACTGTACCTAGTTCTGAACCTAGCACAGA
ACCTGTTGCAGTACCTAGTACTGAACCTTCCACCAGTACCGTACCCAGTA
CCATATCTAGTACCTTACCTAGTACAGTCTCTAGTACCTTACCTAGTGCA
GTCTCTAGTACCTTACCTAGTACAGTCTCTAGTACCTTACCTAGTGCAGT
CTCTAGTACCTTACCTAGTACCTTATCTAGTACTACATCTAGTACTTTAC
CTAGTACAGTATCTAGTACCTTACCTAGTACCTTAGCCAGTACTGTATCT
ACTACCTTATCTAGTACTGTATCTAGTACCTTACCTAGGATTGAAGAAAT
TACTGTACCAAGTACTGTAGCCAGTACGGTGCCTAGTACTGTGCAAAGTG
CTGAGCCGAGTTCTTTACCTAGTACTGAACAGGTTACCATACCAAGTACT
GTACCTAGTACTGTGACGAGCACTATAAAGAGTACTGAACCGAGTACTGA
AGCCAGTACTGTACCTACTACTGTACCCAGTACTGTGACGAGTACTATAG
CGAGTACTGAACCCAGCACTGTACCCAATACTGTGACGAGTACTATAGCG
AGTACTGAAGCCAGTACTGTACCTACTACTGAACCCAGTACTGTGACGAG
TACTATAGCGAGTACTGAACCCAGTAGTGCGGCATCTAGTACAGTACCTG
GTAATGCCCCAAGTACTTTAGCCAGTGCAATACCTAGTACTCCCTTTACT
ACGTTGAGTCCTTCGCCTAGCATAATAACTACGATCATGACGGCAACTGA
ACCAATATCTACTGAAAGTCCTGATACCGAGGGATAAAAGCTTTCTAGAC
CAT

BS26335.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:25:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG32834-RB 1671 CG32834-PB 1..1671 17..1687 8355 100 Plus
CG32834-RB 1671 CG32834-PB 919..1450 983..1526 780 76.7 Plus
CG32834-RB 1671 CG32834-PB 967..1510 935..1466 780 76.7 Plus
CG32834-RB 1671 CG32834-PB 931..1400 1055..1524 520 74 Plus
CG32834-RB 1671 CG32834-PB 1039..1508 947..1416 520 74 Plus
CG32834-RB 1671 CG32834-PB 919..1004 1103..1188 220 83.7 Plus
CG32834-RB 1671 CG32834-PB 931..1028 1091..1188 205 80.6 Plus
CG32834-RB 1671 CG32834-PB 919..980 1127..1188 190 87.1 Plus
CG32834-RB 1671 CG32834-PB 1185..1330 1381..1526 190 75.3 Plus
CG32834-RB 1671 CG32834-PB 1365..1510 1201..1346 190 75.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:25:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32834-RB 1752 CG32834-RB 19..1689 17..1687 8355 100 Plus
CG32834-RB 1752 CG32834-RB 937..1468 983..1526 780 76.7 Plus
CG32834-RB 1752 CG32834-RB 985..1523 935..1473 670 75 Plus
CG32834-RB 1752 CG32834-RB 949..1418 1055..1524 520 74 Plus
CG32834-RB 1752 CG32834-RB 1057..1526 947..1416 520 74 Plus
CG32834-RB 1752 CG32834-RB 1009..1528 935..1466 515 74.3 Plus
CG32834-RB 1752 CG32834-RB 937..1022 1103..1188 220 83.7 Plus
CG32834-RB 1752 CG32834-RB 949..1046 1091..1188 205 80.6 Plus
CG32834-RB 1752 CG32834-RB 937..998 1127..1188 190 87.1 Plus
CG32834-RB 1752 CG32834-RB 1203..1348 1381..1526 190 75.3 Plus
CG32834-RB 1752 CG32834-RB 1383..1528 1201..1346 190 75.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:25:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22982605..22984275 1687..17 8355 100 Minus
2R 25286936 2R 22982826..22983357 1526..983 780 76.7 Minus
2R 25286936 2R 22982771..22983309 1473..935 670 75 Minus
2R 25286936 2R 22982768..22983237 1416..947 520 74 Minus
2R 25286936 2R 22982876..22983345 1524..1055 520 74 Minus
2R 25286936 2R 22982766..22983285 1466..935 515 74.3 Minus
2R 25286936 2R 22983272..22983357 1188..1103 220 83.7 Minus
2R 25286936 2R 22983248..22983345 1188..1091 205 80.6 Minus
2R 25286936 2R 22982766..22982911 1346..1201 190 75.3 Minus
2R 25286936 2R 22982946..22983091 1526..1381 190 75.3 Minus
2R 25286936 2R 22983296..22983357 1188..1127 190 87.1 Minus
Blast to na_te.dros performed on 2014-11-27 13:25:49 has no hits.

BS26335.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:42:33 Download gff for BS26335.complete
Subject Subject Range Query Range Percent Splice Strand
CG32834-RB 1..1669 17..1685 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:50:43 Download gff for BS26335.complete
Subject Subject Range Query Range Percent Splice Strand
CG32834-RB 19..1687 17..1685 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:18:16 Download gff for BS26335.complete
Subject Subject Range Query Range Percent Splice Strand
CG32834-RB 19..1687 17..1685 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:18:16 Download gff for BS26335.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22982607..22984275 17..1685 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:50:43 Download gff for BS26335.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18870130..18871798 17..1685 100   Minus

BS26335.pep Sequence

Translation from 16 to 1686

> BS26335.pep
MIWSVFLFLLAALLRPVRGDLDAQSRIIGGYDVDIEDAPYQAEVIIDGTA
ICSGAIITSDTIITAASCVQSYGSIEVRVGTSSRDYDGTGFLLEVCEIIN
HPQYNCWRFDNNLALLKLCDPLKTSEAIQPISIAEDEPDDGSWCTVSGWG
STSWWGSWWDRCFGSLPDYLQMAWVSVYNREQCAADRGVWFGLWDNGISY
LTLCTHNGAGGCSYDTGAPLVIDGQLVGILSEGGCTTKPDVYANVPWFTG
WIAENTEDEDTTASTSTSSDSSTTVASTTTATVPSTVPSSEPSTEPVAVP
STEPSTSTVPSTISSTLPSTVSSTLPSAVSSTLPSTVSSTLPSAVSSTLP
STLSSTTSSTLPSTVSSTLPSTLASTVSTTLSSTVSSTLPRIEEITVPST
VASTVPSTVQSAEPSSLPSTEQVTIPSTVPSTVTSTIKSTEPSTEASTVP
TTVPSTVTSTIASTEPSTVPNTVTSTIASTEASTVPTTEPSTVTSTIAST
EPSSAASSTVPGNAPSTLASAIPSTPFTTLSPSPSIITTIMTATEPISTE
SPDTEG*

BS26335.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32834-PB 556 CG32834-PB 1..556 1..556 2842 100 Plus
CG9897-PA 247 CG9897-PA 1..247 1..258 482 44.1 Plus
CG46026-PA 666 CG46026-PA 200..521 236..552 388 35 Plus
CG46026-PA 666 CG46026-PA 128..484 229..554 386 34.2 Plus
CG46026-PA 666 CG46026-PA 256..569 256..554 369 33.8 Plus
CG46026-PA 666 CG46026-PA 122..399 261..554 368 35.9 Plus
Muc96D-PA 881 CG31439-PA 208..501 261..554 368 26.9 Plus
CG46026-PA 666 CG46026-PA 274..588 256..551 367 34.9 Plus
CG46026-PA 666 CG46026-PA 341..654 256..554 364 33.5 Plus
CG46026-PA 666 CG46026-PA 307..610 255..554 362 34.3 Plus
CG46026-PA 666 CG46026-PA 360..664 236..546 360 34.6 Plus
CG32833-PA 268 CG32833-PA 33..268 22..257 360 35.3 Plus
CG46026-PA 666 CG46026-PA 310..639 259..551 359 33.5 Plus
CG46026-PA 666 CG46026-PA 410..666 256..528 359 35.8 Plus
CG46026-PA 666 CG46026-PA 121..365 314..554 287 35.3 Plus
CG46026-PA 666 CG46026-PA 437..666 252..492 272 33.1 Plus
CG46026-PA 666 CG46026-PA 517..665 236..388 190 33.8 Plus