BS26337.complete Sequence
542 bp assembled on 2011-08-24
GenBank Submission: KX800276
> BS26337.complete
GAAGTTATCAGTCGACATGAAGTTTATGGCAATATGCCTATTGGCAAATA
TTGGCTACATACTTGGCACTACAATTGGCCAGCTTAATGACGAAGCCACA
ATTCGACTAAAGGGACTTGTGGAGAAATATAAACTGCAAGCTCTTAGCAA
TCCCGAATTCTCTCAGTGGATTGGCAAACTTGAGAAAACTAGCAAGTCGA
GAAGATTGGAAGACAAAATGAAGGTCAAAGCTGAATTTAAAAACTACGAC
GAACGTCGCTTGCAATTGGAAAATAAAATTAGGGAACGCATTACGGCGAT
CGATGACCTCATATCCGATATTATGGCCAAAGTCCCGATAAAGGATAAAG
GGTGTCTCAAGTATTACCAACGCCAGAAAAGATCCCTTAAATTGGCCCAC
AATTTTTCGAATTTAACTAAGCAAACAAACCTCATACGCAACTCGAAACA
ATGCGAAACAACTAAAGTGCAGTCTAGTGAACTAAGTGAAAGCTCTGAAA
ATCCGGATGAGTATAGTTATTACTAAAAGCTTTCTAGACCAT
BS26337.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:36:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp38D-RB | 510 | CG42606-PB | 1..510 | 17..526 | 2550 | 100 | Plus |
Sfp38D-RA | 510 | CG42606-PA | 1..510 | 17..526 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:36:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp38D-RB | 1234 | CG3-RB | 24..533 | 17..526 | 2550 | 100 | Plus |
Sfp38D-RA | 640 | CG42606-RA | 24..533 | 17..526 | 2550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:36:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20641049..20641515 | 60..526 | 2335 | 100 | Plus |
2L | 23513712 | 2L | 20640940..20640982 | 17..59 | 215 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 21:36:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 207..331 | 525..400 | 113 | 60.8 | Minus |
BS26337.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:07 Download gff for
BS26337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp38D-RA | 24..531 | 17..524 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:31:32 Download gff for
BS26337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp38D-RA | 24..531 | 17..524 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:37:49 Download gff for
BS26337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp38D-RA | 24..531 | 17..524 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:37:49 Download gff for
BS26337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20640940..20640982 | 17..59 | 100 | -> | Plus |
2L | 20641049..20641513 | 60..524 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:31:32 Download gff for
BS26337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20640940..20640982 | 17..59 | 100 | -> | Plus |
arm_2L | 20641049..20641513 | 60..524 | 100 | | Plus |
BS26337.pep Sequence
Translation from 16 to 525
> BS26337.pep
MKFMAICLLANIGYILGTTIGQLNDEATIRLKGLVEKYKLQALSNPEFSQ
WIGKLEKTSKSRRLEDKMKVKAEFKNYDERRLQLENKIRERITAIDDLIS
DIMAKVPIKDKGCLKYYQRQKRSLKLAHNFSNLTKQTNLIRNSKQCETTK
VQSSELSESSENPDEYSYY*
BS26337.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp38D-PB | 169 | CG42606-PB | 1..169 | 1..169 | 858 | 100 | Plus |
Sfp38D-PA | 169 | CG42606-PA | 1..169 | 1..169 | 858 | 100 | Plus |
CG17472-PA | 159 | CG17472-PA | 1..142 | 1..146 | 232 | 36.1 | Plus |
CG31680-PA | 147 | CG31680-PA | 1..129 | 1..146 | 211 | 33.6 | Plus |