BS26343.complete Sequence
749 bp assembled on 2011-09-14
GenBank Submission: KX805640
> BS26343.complete
GAAGTTATGAGTCAACATGGTTTTGACGAACTTCGAGTGCTGGGCACATG
GTGATCCGTCGTCGTCGGCGGCCGCCACTTTCGAAACTGGAGCGCTGCGT
CCTTCGATGGATCCGTTCAATCCACGCGCCGTCACCTTCATGACCGACGC
CAACAACAACAACAACAACAATGATGGCAATAACCTCGCGGCACAACCGA
TGCCGGTCGTCCTGCCTCCGGAAGTCCTGCGCTGCAAGAAGCGCCTGAAT
CCCGGTCACAATCCTGTCGGGGATTTGGACACGGACCAACCGGTGTACAC
CAAGAGATGTCGCTACGACGAGTCTGACTTGGCCGCCCAGTACTGCAATG
ATTTCTTTTCCTTGCCTGCCACACAAATAATTGGAACGCAGGCCTCTTTG
ATGGATTACGAGATGCAGGCCACCGGCGGCATGATGATGATGGAATCGGA
GACGAGTTTTCCAGCGCAGCAGCAGCAACATCAAGAGCAACAGCAACATC
CACAGCAGCCACATCAATATCAGCGCATTCATCAGCATTATCAAGAATCC
GCAGAGCAACGAGTGCCGTCCCCGCAGCAAAAGTCAAGAAAATCTAATAA
TTCTATTGGGAAAATCAAATTAAAGTCCATAGGCAGCGAAGCCGAAGCGG
ACTTGTATATAGCCACACACGGCGGCAGTCTGCACCACTTTTGTGGGCTC
GGCGGATCGGAGCTAGAGGAGTCTGATATATGAAAGCTTTCTAGACCAT
BS26343.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:30:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32428-RC | 717 | CG32428-PC | 1..717 | 17..733 | 3585 | 100 | Plus |
| CG32428-RB | 588 | CG32428-PB | 1..529 | 17..545 | 2645 | 100 | Plus |
| CG32428-RA | 588 | CG32428-PA | 1..529 | 17..545 | 2645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32428-RC | 1238 | CG32428-RC | 399..1115 | 17..733 | 3585 | 100 | Plus |
| CG32428-RB | 1804 | CG32428-RB | 345..873 | 17..545 | 2645 | 100 | Plus |
| CG32428-RA | 1213 | CG32428-RA | 399..927 | 17..545 | 2645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:30:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20472641..20472974 | 350..17 | 1670 | 100 | Minus |
| 3L | 28110227 | 3L | 20470954..20471149 | 545..350 | 980 | 100 | Minus |
| 3L | 28110227 | 3L | 20469797..20469986 | 733..544 | 950 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:30:50 has no hits.
BS26343.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:40 Download gff for
BS26343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32428-RC | 356..1071 | 17..732 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:16:54 Download gff for
BS26343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32428-RC | 399..1114 | 17..732 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:11 Download gff for
BS26343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32428-RC | 399..1114 | 17..732 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:11 Download gff for
BS26343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20469798..20469984 | 546..732 | 100 | <- | Minus |
| 3L | 20470954..20471148 | 351..545 | 100 | <- | Minus |
| 3L | 20472641..20472974 | 17..350 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:16:54 Download gff for
BS26343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20462898..20463084 | 546..732 | 100 | <- | Minus |
| arm_3L | 20464054..20464248 | 351..545 | 100 | <- | Minus |
| arm_3L | 20465741..20466074 | 17..350 | 100 | | Minus |
BS26343.pep Sequence
Translation from 16 to 732
> BS26343.pep
MVLTNFECWAHGDPSSSAAATFETGALRPSMDPFNPRAVTFMTDANNNNN
NNDGNNLAAQPMPVVLPPEVLRCKKRLNPGHNPVGDLDTDQPVYTKRCRY
DESDLAAQYCNDFFSLPATQIIGTQASLMDYEMQATGGMMMMESETSFPA
QQQQHQEQQQHPQQPHQYQRIHQHYQESAEQRVPSPQQKSRKSNNSIGKI
KLKSIGSEAEADLYIATHGGSLHHFCGLGGSELEESDI*
BS26343.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32428-PC | 238 | CG32428-PC | 1..238 | 1..238 | 1277 | 100 | Plus |
| CG32428-PB | 195 | CG32428-PB | 1..176 | 1..176 | 961 | 100 | Plus |
| CG32428-PA | 195 | CG32428-PA | 1..176 | 1..176 | 961 | 100 | Plus |
