BS26345.complete Sequence
782 bp assembled on 2011-08-24
GenBank Submission: KX800660
> BS26345.complete
GAAGTTATCAGTCGACATGTTGCCCCACGATAGGAAAATACTTAGGCAAC
ATACACGCCAGAACCAGAATACGAATCGCCGGCGCCCCAGATTCACCAAC
AATAGCTTCCATACCAAAATGGGCAGCAACTCCAAGGCAGACCCCATCTC
GCTGACCTTCCACGACTCCTGCCTGCGGATGTCCGACGTCCAGTTGCTCC
ACGGCCCGCACTGGCTGAACGACCAGATCCTGAGCTTCTACTACGAATAC
CTGGCCCACATGAAGTACAAGACCAATGCGGATCTGCACTTCATTGCGCC
GGAGATTACGCAGTGTATGAAGTACATGGGCGACCAGGAGCTGAAGCAGC
TTCTCGACCAGAGCAACACCACTGGCAAGCCCTTTATCTTCTTCGCGCTG
AACGACAACGAAACCACCGATGCTGGTGGCAGCCACTGGTCACTGTTGGT
CTTCTCGCGTCCGGAGAAGACCTTCTATCACTTCGATTCGTATGGGAACA
ACAACACGGGCAACTCCCTGGAGCTGATGAACAAGATCAAGGACCTGCTT
GGCGTCCGAATGGCCAAATTCCGGCCCATGCGCTGCCTACAGCAGGCGAA
CGGCTACGACTGTGGCATCCATGTTATCTGCATGACCGACCACATTGCCG
ATTACCTAAACAGATACGAGGTGATCGACGGACTGCCGTCGCTGCACATC
GACACCGTGAAGGCGAAGCGCACCGAGCTACTGAAACTCATCCTGTCGCT
GGGCGGCAAGGGCTAGAAGCTTTCTAGACCAT
BS26345.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:38:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Den1-RC | 750 | CG8493-PC | 1..750 | 17..766 | 3750 | 100 | Plus |
| Den1-RA | 648 | CG8493-PA | 1..648 | 119..766 | 3240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:38:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Den1-RC | 1161 | CG8493-RC | 121..875 | 17..771 | 3760 | 99.9 | Plus |
| Den1-RA | 1257 | CG8493-RA | 245..971 | 45..771 | 3620 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:38:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12338531..12339258 | 44..771 | 3625 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:38:50 has no hits.
BS26345.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:10 Download gff for
BS26345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RC | 126..870 | 22..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:32:27 Download gff for
BS26345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RC | 126..870 | 22..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:35 Download gff for
BS26345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RC | 126..870 | 22..766 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:38:35 Download gff for
BS26345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12338425..12338448 | 22..45 | 100 | -> | Plus |
| 2R | 12338533..12339253 | 46..766 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:32:27 Download gff for
BS26345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8225930..8225953 | 22..45 | 100 | -> | Plus |
| arm_2R | 8226038..8226758 | 46..766 | 100 | | Plus |
BS26345.pep Sequence
Translation from 16 to 765
> BS26345.pep
MLPHDRKILRQHTRQNQNTNRRRPRFTNNSFHTKMGSNSKADPISLTFHD
SCLRMSDVQLLHGPHWLNDQILSFYYEYLAHMKYKTNADLHFIAPEITQC
MKYMGDQELKQLLDQSNTTGKPFIFFALNDNETTDAGGSHWSLLVFSRPE
KTFYHFDSYGNNNTGNSLELMNKIKDLLGVRMAKFRPMRCLQQANGYDCG
IHVICMTDHIADYLNRYEVIDGLPSLHIDTVKAKRTELLKLILSLGGKG*
BS26345.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Den1-PC | 249 | CG8493-PC | 1..249 | 1..249 | 1343 | 100 | Plus |
| Den1-PA | 215 | CG8493-PA | 1..215 | 35..249 | 1156 | 100 | Plus |
| CG1503-PB | 307 | CG1503-PB | 53..299 | 15..247 | 335 | 33.6 | Plus |
| CG1503-PA | 307 | CG1503-PA | 53..299 | 15..247 | 335 | 33.6 | Plus |
