BS26352.complete Sequence
1292 bp assembled on 2011-08-24
GenBank Submission: KX800962
> BS26352.complete
GAAGTTATCAGTCGACATGGATGCCTTGGACGGTACGACAATGGAACTGC
ACAACAGTTTTCTACAGGTGGAGAGCACAACACACTTTCCTTTGGATTGC
ATCAGCGACATCGAGGTGGTGGATGGAAATGAATTAAAAGCCTCATTTTA
CGAATATGCAGATGCTGTGCCAAAATATTTTAACGACCAAATAGGGAAAT
TGAGCGAAGGGATAAGTTTCACGGTGACTGGGAATCTCTCTGTAAACTGC
GAGAGGTTTTCCATCAATCTGGTTTATAACAATGACTCTCGAGATGTGGC
GCTCCACATTAATCCACGGTTGCCACAAAACTATATTGTCCGCAACACCA
AAGTACAGGACATTTGGGGAAACGAGGAAGTGTCCTCGGCATTGCCGTTT
CTACTAAGTCGAGGCGAGGAGTTTTCCATTCAAGTGCTAGTTACTGAGGC
ATGCTATATGATATCGGTAAACGGACAACACTTTGCAGCGTACACTCATC
GAATCCCTTATAGGGATGTTCGCATTCTGGAAGTGAAGGGAGATGTAAGT
AACGTGGAAATGAAGCGAACTTTGGTCTTAAAATATCCTGAGCGATTACC
CCAGTCAGAGGCTAATAACATTGAGCTTCACATAGATGATGGGATTAATG
AAATTGATGCCAGCGTTGAGGAGACTGTTAAAATACCTCATGAGTGGTGC
ATTATTAGCGCCCCGAACACACAGTCGGACAGTTCGCCTAAGCGTAACAA
TAGTTCGAATGATCTTGGCCTTACTTTGCCTTATTATGGAGCATTGCCAC
CAAATTCGTTGGTCGATGGTCGATGCTTGAAGATTGAAGGGAGAGTGCGA
TTACTTCCCCACTCGTTTTATATAAACCTGCAACAGGGGCAGGACATATG
GCCACATCCAGTAATTGCATTCCACTTAAACCCACGTTTTTCGAAAGCAA
GCAGCGGCGCTATTGGAAAGGCGGTGGTGTGTAGGAATGCCTGGCTTAAT
GGAGCTTGGGCACAAGAAGAGCGTTCGGAGTTTGACACAAACTTTCGCCC
TGGTCGGTCTTTTTGTTTAGCCATTGTTTGTACCAAAACATCCTTTGAGG
TGTATGTCAATCGGCAGTTTATGACTGATTTTAAATATAAGGTTAGCCCT
GAGGTGGTGGACACTGTCTACATACAAGGAGATGTTAAACTTTGGAATGT
AACGCTGGAAAAAAATCAGATGATTAAAGGCAAAAATATGCGAGTCTATC
AGAATCCGTGGTTCTTTAGTGAGTAGAAGCTTTCTAGACCAT
BS26352.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:41:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| galectin-RE | 1260 | CG11372-PE | 1..1260 | 17..1276 | 6300 | 100 | Plus |
| galectin-RA | 1512 | CG11372-PA | 253..1512 | 17..1276 | 6090 | 98.9 | Plus |
| galectin-RD | 1206 | CG11372-PD | 70..1206 | 140..1276 | 5685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:41:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| galectin-RE | 1458 | CG11372-RE | 86..1350 | 17..1281 | 6310 | 99.9 | Plus |
| galectin-RA | 1841 | CG11372-RA | 469..1733 | 17..1281 | 6100 | 98.8 | Plus |
| galectin-RF | 1536 | CG11372-RF | 287..1428 | 140..1281 | 5695 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:41:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 75076..76103 | 254..1281 | 5125 | 99.9 | Plus |
| 2L | 23513712 | 2L | 73570..73693 | 17..140 | 620 | 100 | Plus |
| 2L | 23513712 | 2L | 74903..75020 | 140..257 | 590 | 100 | Plus |
| 2L | 23513712 | 2L | 72855..72978 | 17..140 | 410 | 88.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:41:09 has no hits.
BS26352.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:14 Download gff for
BS26352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RE | 86..1345 | 17..1276 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:33:41 Download gff for
BS26352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RE | 86..1345 | 17..1276 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:39:35 Download gff for
BS26352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RE | 86..1345 | 17..1276 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:39:35 Download gff for
BS26352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 73570..73692 | 17..139 | 100 | -> | Plus |
| 2L | 74903..75018 | 140..255 | 100 | -> | Plus |
| 2L | 75078..76098 | 256..1276 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:33:41 Download gff for
BS26352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 73570..73692 | 17..139 | 100 | -> | Plus |
| arm_2L | 74903..75018 | 140..255 | 100 | -> | Plus |
| arm_2L | 75078..76098 | 256..1276 | 100 | | Plus |
BS26352.pep Sequence
Translation from 16 to 1275
> BS26352.pep
MDALDGTTMELHNSFLQVESTTHFPLDCISDIEVVDGNELKASFYEYADA
VPKYFNDQIGKLSEGISFTVTGNLSVNCERFSINLVYNNDSRDVALHINP
RLPQNYIVRNTKVQDIWGNEEVSSALPFLLSRGEEFSIQVLVTEACYMIS
VNGQHFAAYTHRIPYRDVRILEVKGDVSNVEMKRTLVLKYPERLPQSEAN
NIELHIDDGINEIDASVEETVKIPHEWCIISAPNTQSDSSPKRNNSSNDL
GLTLPYYGALPPNSLVDGRCLKIEGRVRLLPHSFYINLQQGQDIWPHPVI
AFHLNPRFSKASSGAIGKAVVCRNAWLNGAWAQEERSEFDTNFRPGRSFC
LAIVCTKTSFEVYVNRQFMTDFKYKVSPEVVDTVYIQGDVKLWNVTLEKN
QMIKGKNMRVYQNPWFFSE*
BS26352.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| galectin-PE | 419 | CG11372-PE | 1..419 | 1..419 | 2219 | 100 | Plus |
| galectin-PA | 503 | CG11372-PA | 85..503 | 1..419 | 2150 | 97.1 | Plus |
| galectin-PB | 402 | CG11372-PB | 24..402 | 41..419 | 2006 | 99.7 | Plus |
| galectin-PD | 401 | CG11372-PD | 24..401 | 42..419 | 2005 | 100 | Plus |
| galectin-PF | 272 | CG11372-PF | 1..272 | 148..419 | 1454 | 100 | Plus |
