BS26353.complete Sequence
446 bp assembled on 2011-08-24
GenBank Submission: KX802993
> BS26353.complete
GAAGTTATCAGTCGACATGTGCTGCAATGCCAACCGCCAGCTATTATGTA
TCTTTACCGGAGCATTGGCGATACTGATATCAACTTTATGTTTAGGATTC
ATGCTTTACCGGCTAGGCACGACTGGTATAAACCATTGGGAGGAGGCGTA
CCTGGTAGCCTGGGCTGTCATTATTTTAGCAGCGGTACCTCTAATTGTAG
GAGCAATAAAAGAAATTCGCTATCTTTTGGTGATTTGGATAGTAGTCGCT
TTAATAAGCGGCATTTCTCTGATAGTTATTCAAATAGAAATGTTTCATAG
CTTTTTTCATAAGGATCCTGATACAGCCTTTCATATTCTCGGTGGTATAG
TCATTATAGTTTTCGTATTATTGCTCTGCTGTTTTCTATACTTCCCATAT
ACGTATGCGCGTGAGCTGGAAGGAGATTAAAAGCTTTCTAGACCAT
BS26353.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:41:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42690-RB | 414 | CG42690-PB | 1..414 | 17..430 | 2070 | 100 | Plus |
| CG42690-RA | 414 | CG42690-PA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:41:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43195-RA | 1281 | CG43195-RA | 198..611 | 17..430 | 2070 | 100 | Plus |
| CG42690-RB | 1286 | CG42690-RB | 198..611 | 17..430 | 2070 | 100 | Plus |
| CG42690-RA | 761 | CG42690-RA | 198..611 | 17..430 | 2070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:41:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19945230..19945386 | 368..212 | 785 | 100 | Minus |
| 2R | 25286936 | 2R | 19945580..19945680 | 117..17 | 505 | 100 | Minus |
| 2R | 25286936 | 2R | 19945438..19945536 | 212..114 | 495 | 100 | Minus |
| 2R | 25286936 | 2R | 19945108..19945169 | 430..369 | 310 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 21:41:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 2896..2975 | 418..335 | 105 | 60.7 | Minus |
BS26353.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:15 Download gff for
BS26353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42690-RA | 10..421 | 17..428 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:33:52 Download gff for
BS26353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42690-RA | 10..421 | 17..428 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:39:45 Download gff for
BS26353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42690-RA | 198..609 | 17..428 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:39:45 Download gff for
BS26353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19945581..19945680 | 17..116 | 100 | | Minus |
| 2R | 19945110..19945169 | 369..428 | 100 | <- | Minus |
| 2R | 19945230..19945386 | 212..368 | 100 | <- | Minus |
| 2R | 19945439..19945533 | 117..211 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:33:52 Download gff for
BS26353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15832735..15832891 | 212..368 | 100 | <- | Minus |
| arm_2R | 15832944..15833038 | 117..211 | 100 | <- | Minus |
| arm_2R | 15833086..15833185 | 17..116 | 100 | | Minus |
| arm_2R | 15832615..15832674 | 369..428 | 100 | <- | Minus |
BS26353.pep Sequence
Translation from 16 to 429
> BS26353.pep
MCCNANRQLLCIFTGALAILISTLCLGFMLYRLGTTGINHWEEAYLVAWA
VIILAAVPLIVGAIKEIRYLLVIWIVVALISGISLIVIQIEMFHSFFHKD
PDTAFHILGGIVIIVFVLLLCCFLYFPYTYARELEGD*
BS26353.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42690-PB | 137 | CG42690-PB | 1..137 | 1..137 | 713 | 100 | Plus |
| CG42690-PA | 137 | CG42690-PA | 1..137 | 1..137 | 713 | 100 | Plus |
| CG42691-PA | 140 | CG42691-PA | 1..135 | 1..135 | 336 | 48.1 | Plus |
| CG43195-PA | 138 | CG43195-PA | 1..133 | 1..135 | 238 | 35.6 | Plus |
| CG43195-PB | 129 | CG43195-PB | 1..124 | 1..135 | 199 | 33.3 | Plus |
