BS26354.complete Sequence
893 bp assembled on 2011-08-24
GenBank Submission: KX803492
> BS26354.complete
GAAGTTATCAGTCGACATGAGCACCTCACTAAGATCCAGCCGAGGAATCA
AGCTTATGAAGTCGGGCCATTTCTCAGATGTATGCATTCGCATAGATTGT
ATTAGCTTCCGGTGCCACAAAATCATCTTAGCCTGTGCTTCTGAGTTTTT
TGAGAGATTATTTCAAGAAGATTCGGAGGAATTTTTGTTAGATGGAACAA
CCCCAGAAGTTTTTCAGATATTTCTTGATTTTATATACGCTCCTAACGAT
GACCAATTCGGCAATCTTGAACCGGATGTATTGATGTGTCTTCTGAAGTG
CGCAAATATGTGGCTCGCTGTGGAAATAGAAGAAAGATGCATCGACATTC
TATTAGATCTATCCCCTGACATGGATCCGGATGCCCTTATTGCACTTTTT
GCAGTGTCGCATTGTGTGGATCACAAAGTATTAATGGAACAGTCTATTGG
AGTCCTGCAACATATATGGAGAAACGAAATGGACTGTCCATCAACTGTCA
GAATGGAAGTCGACTGCTTCGGAGAATATTTTAAAAACACCTCGGGAATG
CTTTCTCCGCGTAGGCGCTTTGTCATGGTGGAAAACTGGATAAAAGGCAA
TGATTTGAATAATAGACCGTGCTCTCAAAAAGATAAAATTAACCAAATTA
TTAAGAGCATTAACTTTTTGGAAATGTCATTGGAGGACTTTTACAATGGT
CCAGGAAAGTCTAACGTTTTGCCCGATTCAGACAAGTTCGAAATAATGTA
TAAACTTGCCCGTTCAAATAATGAATGGACTGTTATATTGGACGAAAGGG
ATCGAGATAGGTACTACATAATTGTTTTTGTGAAGAAGAAGTCGACTAAA
TTTGTGTTTTATTTAAAGTTGATATAAAAGCTTTCTAGACCAT
BS26354.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:42:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43120-RA | 861 | CG43120-PA | 1..861 | 17..877 | 4305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:42:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43120-RA | 1270 | CG43120-RA | 53..913 | 17..877 | 4305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:42:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14382517..14382942 | 452..877 | 2130 | 100 | Plus |
3L | 28110227 | 3L | 14382048..14382469 | 32..453 | 2110 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:42:09 has no hits.
BS26354.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:16 Download gff for
BS26354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43120-RA | 53..911 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:34:11 Download gff for
BS26354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43120-RA | 53..911 | 17..875 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:01 Download gff for
BS26354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43120-RA | 53..911 | 17..875 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:40:01 Download gff for
BS26354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14381965..14381981 | 17..33 | 100 | -> | Plus |
3L | 14382050..14382467 | 34..451 | 100 | -> | Plus |
3L | 14382517..14382940 | 452..875 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:34:11 Download gff for
BS26354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14375065..14375081 | 17..33 | 100 | -> | Plus |
arm_3L | 14375150..14375567 | 34..451 | 100 | -> | Plus |
arm_3L | 14375617..14376040 | 452..875 | 100 | | Plus |
BS26354.pep Sequence
Translation from 16 to 876
> BS26354.pep
MSTSLRSSRGIKLMKSGHFSDVCIRIDCISFRCHKIILACASEFFERLFQ
EDSEEFLLDGTTPEVFQIFLDFIYAPNDDQFGNLEPDVLMCLLKCANMWL
AVEIEERCIDILLDLSPDMDPDALIALFAVSHCVDHKVLMEQSIGVLQHI
WRNEMDCPSTVRMEVDCFGEYFKNTSGMLSPRRRFVMVENWIKGNDLNNR
PCSQKDKINQIIKSINFLEMSLEDFYNGPGKSNVLPDSDKFEIMYKLARS
NNEWTVILDERDRDRYYIIVFVKKKSTKFVFYLKLI*
BS26354.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43120-PA | 286 | CG43120-PA | 1..286 | 1..286 | 1516 | 100 | Plus |
CG11714-PC | 371 | CG11714-PC | 31..304 | 30..250 | 246 | 24.5 | Plus |
CG11714-PD | 383 | CG11714-PD | 43..316 | 30..250 | 246 | 24.5 | Plus |
CG11714-PA | 383 | CG11714-PA | 43..316 | 30..250 | 246 | 24.5 | Plus |