BS26359.complete Sequence
800 bp assembled on 2011-08-24
GenBank Submission: KX801082
> BS26359.complete
GAAGTTATCAGTCGACATGGACAATAAGAAGGATATATACAATCTGTGGG
TGCAGTACACGACAAAGAATGATGAAACCCACTTCCGGCAATTTGTGGCC
CGCTTCGTGGCCATTTGGAGGAGCCAACTGCAGCTAGACTTTCAGGCGGA
AAATTGCCCGATGTGGCACGAGGTTCAGCCGGATAGTGGTCCCCACTTGG
GCCGCCTCCCGGATGAACTCCTGCCCGCCATCGGTAAATTCATCATTGTA
GCCAGAGATGTTTGCGAAACGGAAGGGAAACTGGAGGAGCAGGCCATTGA
AGAAGTAGCCATACTCGTGGATTGTCTGGTGATCGTGTGCCGGCACTTTG
ATAACATACTGTCCATCATCAAGTATGAATACAAGCCGAATTTGATCGCC
ATACTCTCCAGGGTGTTCAAACAACAAATGGAGCTGCCGCAGAGCGTGCC
CGCAATAAGCCACCTGTTTAGCAGTTTCTCGGCATTCCTGGAAGTCATGT
ATGATCCATATCTGACGTGGCGCAGCTTCGTGCGAGGCCAGTCAGCTGAC
TACAGTCGTCTTTCATATAAACCCCACTCGGTTCATGTGGAAATTGTCCC
CTTTATTTATGATTGCTTTCAGGAGGAGAAGCTCATCCGATATGCGGAAA
TTGGCGAAAGCCTGCTAAACATCCTGGGCGCTGTGATTTGCGGCTCACAG
GTAGCGCCAGAAAGCGTCTCCAGTCCCTTCCTGTGTAGTCCTTTCTCTCT
TAAAAACCGTTTAATTATTAACCTCACTTCCTGAAAGCTTTCTAGACCAT
BS26359.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:39:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43367-RD | 8139 | CG43367-PD | 1..684 | 17..700 | 3420 | 100 | Plus |
CG43367-RC | 8265 | CG43367-PC | 1..684 | 17..700 | 3420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:39:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43367-RE | 10170 | CG43367-RE | 293..1066 | 17..790 | 3855 | 99.9 | Plus |
CG43367-RF | 9817 | CG43367-RF | 1..713 | 78..790 | 3550 | 99.9 | Plus |
CG43367-RD | 9842 | CG43367-RD | 293..976 | 17..700 | 3420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:39:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4194555..4194914 | 65..424 | 1800 | 100 | Plus |
3L | 28110227 | 3L | 4194978..4195164 | 425..611 | 935 | 100 | Plus |
3L | 28110227 | 3L | 4195298..4195477 | 611..790 | 885 | 99.4 | Plus |
3L | 28110227 | 3L | 4194285..4194335 | 17..67 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:39:43 has no hits.
BS26359.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:12 Download gff for
BS26359.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1308-RE | 293..1059 | 17..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:32:54 Download gff for
BS26359.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43367-RE | 293..1059 | 17..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:56 Download gff for
BS26359.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43367-RE | 293..1059 | 17..783 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:38:56 Download gff for
BS26359.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4194285..4194335 | 17..67 | 100 | -> | Plus |
3L | 4194558..4194914 | 68..424 | 100 | -> | Plus |
3L | 4194978..4195164 | 425..611 | 100 | -> | Plus |
3L | 4195299..4195470 | 612..783 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:32:54 Download gff for
BS26359.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4195299..4195470 | 612..783 | 100 | | Plus |
arm_3L | 4194558..4194914 | 68..424 | 100 | -> | Plus |
arm_3L | 4194285..4194335 | 17..67 | 100 | -> | Plus |
arm_3L | 4194978..4195164 | 425..611 | 100 | -> | Plus |
BS26359.pep Sequence
Translation from 16 to 783
> BS26359.pep
MDNKKDIYNLWVQYTTKNDETHFRQFVARFVAIWRSQLQLDFQAENCPMW
HEVQPDSGPHLGRLPDELLPAIGKFIIVARDVCETEGKLEEQAIEEVAIL
VDCLVIVCRHFDNILSIIKYEYKPNLIAILSRVFKQQMELPQSVPAISHL
FSSFSAFLEVMYDPYLTWRSFVRGQSADYSRLSYKPHSVHVEIVPFIYDC
FQEEKLIRYAEIGESLLNILGAVICGSQVAPESVSSPFLCSPFSLKNRLI
INLTS*
BS26359.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43367-PC | 2754 | CG1308-PB | 1..253 | 1..255 | 1205 | 92.5 | Plus |
CG43367-PD | 2712 | CG43367-PD | 1..241 | 1..235 | 1203 | 95.9 | Plus |