BS26368.complete Sequence
422 bp assembled on 2011-08-24
GenBank Submission: KX804402
> BS26368.complete
GAAGTTATCAGTCGACATGCGGATCAATCTCATCTACTTCACGCTGCTTT
GGGCATTCTTCTTCTCAACCGAAGTATTTGGAAAGGTTAAAATACGAGAG
TCCGATATACGACGTATAACAAAGATGGGAAGCTACAAGGTACGCCAAGA
AAAATGTTTGTTCATACCCAGCTATGGACGCTGCAAAAAACATATCGCAG
TATATGGCTACAACATTATAACCAATCGATGCTCAGAATTTACCTACAGT
GGCTGCGGGGGGAATCCCAATCGTTTTATGACTGATAGCCAATGTCGAAA
CACTTGCTATGTGGTTCCAGCGAGGAAAACCGTCTCAGAACCGGACTATT
ATGCCGATGACGGTGTCACAGAACCGATGCAAGTGGATGAAGAGGACGAT
TACTAAAAGCTTTCTAGACCAT
BS26368.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:44:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31515-RB | 390 | CG31515-PB | 1..390 | 17..406 | 1950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31515-RB | 469 | CG31515-RB | 27..417 | 16..406 | 1955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:44:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23388425..23388683 | 406..148 | 1295 | 100 | Minus |
| 3R | 32079331 | 3R | 23388739..23388872 | 149..16 | 670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:44:43 has no hits.
BS26368.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:20 Download gff for
BS26368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31515-RB | 28..415 | 17..404 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:24 Download gff for
BS26368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31515-RB | 28..415 | 17..404 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:13 Download gff for
BS26368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31515-RB | 28..415 | 17..404 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:13 Download gff for
BS26368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23388427..23388681 | 150..404 | 100 | <- | Minus |
| 3R | 23388739..23388871 | 17..149 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:24 Download gff for
BS26368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19214461..19214593 | 17..149 | 100 | | Minus |
| arm_3R | 19214149..19214403 | 150..404 | 100 | <- | Minus |
BS26368.pep Sequence
Translation from 16 to 405
> BS26368.pep
MRINLIYFTLLWAFFFSTEVFGKVKIRESDIRRITKMGSYKVRQEKCLFI
PSYGRCKKHIAVYGYNIITNRCSEFTYSGCGGNPNRFMTDSQCRNTCYVV
PARKTVSEPDYYADDGVTEPMQVDEEDDY*
BS26368.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31515-PB | 129 | CG31515-PB | 1..129 | 1..129 | 704 | 100 | Plus |
| CG31609-PB | 123 | CG31609-PB | 24..94 | 40..108 | 178 | 45.1 | Plus |
| CG17380-PB | 119 | CG17380-PB | 17..75 | 39..97 | 155 | 45.8 | Plus |
| CG2816-PB | 84 | CG2816-PB | 22..81 | 38..97 | 133 | 41.7 | Plus |
