Clone BS26369 Report

Search the DGRC for BS26369

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:263
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG34041-RD
Protein status:BS26369.pep: full length peptide match
Sequenced Size:729

Clone Sequence Records

BS26369.complete Sequence

729 bp assembled on 2011-08-24

GenBank Submission: KX804389

> BS26369.complete
GAAGTTATCAGTCGACATGTATTATTTTCCTACCTCAGTCATGTGGAGCG
CTCTTGGTTTTTCGCCTCTTTTGGCTGTTTTGATTTTACCCAAATGGGCC
TCTTCTACAAAGATGAAAGCCTATTTAGATCTCGATACCCGATTAAAGAC
ACAATTACGGGGCTACTCGGAAGACCTGCAGGATCACATTAGTACCTTAA
ATCGTTATATAGATGATCGAAAATCTGAGCTAGATAAAGTGGGAAAAGAT
CCTGAAGTGTATCTGGGCAATCCTCTTAATAGCTTCTCTTTATTACACCA
TTTGCACTTTGATTGGCCAGCTTGGAGAAAGCTAATGGAAAAGCCCTTAG
CCACAGAGTACATAACCGAGATTCAAGAGATGTGGAGCGAGATGCCAACG
AAAGATGAATATACGAATTCCATTAAAGCTGCCAAGGATTTCCATAAGAA
CGAAACTCAGGGAAATTTTGAATTTAGTCCTTTGGAGTCTCTGCAAATCG
CTCTGCATGCATACGACAAGAAAAACTATACGGAGGCGGAGAACTGGCTA
AATATTACCTTAAATGGTTATAAAAACCTCAGTCTCCAAGAAAAGGATCT
TTATGAAGTTCTAAGTCCTGTTAGTGAGAGTCAGGTGGAGGATCTTTATA
CCAAAGTCAGGAAAATAAAAAATGAATAAAAGCTTTCTGAGACCTATTCG
GTGGGGGCGCGTCGAAAAGGGGGGGGCGG

BS26369.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:45:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG34041-RD 663 CG34041-PD 1..663 17..679 3315 100 Plus
CG34041-RF 1707 CG34041-PF 1..607 17..623 3035 100 Plus
CG34041-RE 1650 CG34041-PE 1..607 17..623 3035 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG34041-RD 697 CG34041-RD 27..690 17..680 3320 100 Plus
CG34041-RF 1733 CG34041-RF 27..633 17..623 3035 100 Plus
CG34041-RE 1676 CG34041-RE 27..633 17..623 3035 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:45:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30508663..30508868 475..680 1030 100 Plus
3R 32079331 3R 30508049..30508248 17..216 970 99 Plus
3R 32079331 3R 30508286..30508438 204..356 765 100 Plus
3R 32079331 3R 30508494..30508616 355..477 615 100 Plus
Blast to na_te.dros performed on 2014-11-26 21:45:03 has no hits.

BS26369.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:20 Download gff for BS26369.complete
Subject Subject Range Query Range Percent Splice Strand
CG34041-RD 27..690 17..680 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:34 Download gff for BS26369.complete
Subject Subject Range Query Range Percent Splice Strand
CG34041-RD 27..690 17..680 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:21 Download gff for BS26369.complete
Subject Subject Range Query Range Percent Splice Strand
CG34041-RD 27..690 17..680 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:21 Download gff for BS26369.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30508666..30508868 478..680 100   Plus
3R 30508049..30508236 17..204 100 -> Plus
3R 30508287..30508438 205..356 100 -> Plus
3R 30508496..30508616 357..477 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:34 Download gff for BS26369.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26333771..26333958 17..204 100 -> Plus
arm_3R 26334009..26334160 205..356 100 -> Plus
arm_3R 26334218..26334338 357..477 100 -> Plus
arm_3R 26334388..26334590 478..680 100   Plus

BS26369.pep Sequence

Translation from 16 to 678

> BS26369.pep
MYYFPTSVMWSALGFSPLLAVLILPKWASSTKMKAYLDLDTRLKTQLRGY
SEDLQDHISTLNRYIDDRKSELDKVGKDPEVYLGNPLNSFSLLHHLHFDW
PAWRKLMEKPLATEYITEIQEMWSEMPTKDEYTNSIKAAKDFHKNETQGN
FEFSPLESLQIALHAYDKKNYTEAENWLNITLNGYKNLSLQEKDLYEVLS
PVSESQVEDLYTKVRKIKNE*

BS26369.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG34041-PD 220 CG34041-PD 1..220 1..220 1164 100 Plus
CG34041-PE 549 CG34041-PE 1..202 1..202 1076 100 Plus
CG34041-PF 568 CG34041-PF 1..202 1..202 1076 100 Plus
CG31021-PB 453 CG31021-PB 2..195 37..220 271 29.1 Plus
PH4alphaPV-PA 525 CG31015-PA 39..227 33..213 213 27.2 Plus