BS26369.complete Sequence
729 bp assembled on 2011-08-24
GenBank Submission: KX804389
> BS26369.complete
GAAGTTATCAGTCGACATGTATTATTTTCCTACCTCAGTCATGTGGAGCG
CTCTTGGTTTTTCGCCTCTTTTGGCTGTTTTGATTTTACCCAAATGGGCC
TCTTCTACAAAGATGAAAGCCTATTTAGATCTCGATACCCGATTAAAGAC
ACAATTACGGGGCTACTCGGAAGACCTGCAGGATCACATTAGTACCTTAA
ATCGTTATATAGATGATCGAAAATCTGAGCTAGATAAAGTGGGAAAAGAT
CCTGAAGTGTATCTGGGCAATCCTCTTAATAGCTTCTCTTTATTACACCA
TTTGCACTTTGATTGGCCAGCTTGGAGAAAGCTAATGGAAAAGCCCTTAG
CCACAGAGTACATAACCGAGATTCAAGAGATGTGGAGCGAGATGCCAACG
AAAGATGAATATACGAATTCCATTAAAGCTGCCAAGGATTTCCATAAGAA
CGAAACTCAGGGAAATTTTGAATTTAGTCCTTTGGAGTCTCTGCAAATCG
CTCTGCATGCATACGACAAGAAAAACTATACGGAGGCGGAGAACTGGCTA
AATATTACCTTAAATGGTTATAAAAACCTCAGTCTCCAAGAAAAGGATCT
TTATGAAGTTCTAAGTCCTGTTAGTGAGAGTCAGGTGGAGGATCTTTATA
CCAAAGTCAGGAAAATAAAAAATGAATAAAAGCTTTCTGAGACCTATTCG
GTGGGGGCGCGTCGAAAAGGGGGGGGCGG
BS26369.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:45:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34041-RD | 663 | CG34041-PD | 1..663 | 17..679 | 3315 | 100 | Plus |
CG34041-RF | 1707 | CG34041-PF | 1..607 | 17..623 | 3035 | 100 | Plus |
CG34041-RE | 1650 | CG34041-PE | 1..607 | 17..623 | 3035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:45:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34041-RD | 697 | CG34041-RD | 27..690 | 17..680 | 3320 | 100 | Plus |
CG34041-RF | 1733 | CG34041-RF | 27..633 | 17..623 | 3035 | 100 | Plus |
CG34041-RE | 1676 | CG34041-RE | 27..633 | 17..623 | 3035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:45:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30508663..30508868 | 475..680 | 1030 | 100 | Plus |
3R | 32079331 | 3R | 30508049..30508248 | 17..216 | 970 | 99 | Plus |
3R | 32079331 | 3R | 30508286..30508438 | 204..356 | 765 | 100 | Plus |
3R | 32079331 | 3R | 30508494..30508616 | 355..477 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:45:03 has no hits.
BS26369.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:20 Download gff for
BS26369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34041-RD | 27..690 | 17..680 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:34 Download gff for
BS26369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34041-RD | 27..690 | 17..680 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:21 Download gff for
BS26369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34041-RD | 27..690 | 17..680 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:21 Download gff for
BS26369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30508666..30508868 | 478..680 | 100 | | Plus |
3R | 30508049..30508236 | 17..204 | 100 | -> | Plus |
3R | 30508287..30508438 | 205..356 | 100 | -> | Plus |
3R | 30508496..30508616 | 357..477 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:34 Download gff for
BS26369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26333771..26333958 | 17..204 | 100 | -> | Plus |
arm_3R | 26334009..26334160 | 205..356 | 100 | -> | Plus |
arm_3R | 26334218..26334338 | 357..477 | 100 | -> | Plus |
arm_3R | 26334388..26334590 | 478..680 | 100 | | Plus |
BS26369.pep Sequence
Translation from 16 to 678
> BS26369.pep
MYYFPTSVMWSALGFSPLLAVLILPKWASSTKMKAYLDLDTRLKTQLRGY
SEDLQDHISTLNRYIDDRKSELDKVGKDPEVYLGNPLNSFSLLHHLHFDW
PAWRKLMEKPLATEYITEIQEMWSEMPTKDEYTNSIKAAKDFHKNETQGN
FEFSPLESLQIALHAYDKKNYTEAENWLNITLNGYKNLSLQEKDLYEVLS
PVSESQVEDLYTKVRKIKNE*
BS26369.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34041-PD | 220 | CG34041-PD | 1..220 | 1..220 | 1164 | 100 | Plus |
CG34041-PE | 549 | CG34041-PE | 1..202 | 1..202 | 1076 | 100 | Plus |
CG34041-PF | 568 | CG34041-PF | 1..202 | 1..202 | 1076 | 100 | Plus |
CG31021-PB | 453 | CG31021-PB | 2..195 | 37..220 | 271 | 29.1 | Plus |
PH4alphaPV-PA | 525 | CG31015-PA | 39..227 | 33..213 | 213 | 27.2 | Plus |