BS26373.complete Sequence
845 bp assembled on 2011-08-24
GenBank Submission: KX800773
> BS26373.complete
GAAGTTATCAGTCGACATGGGAAAATTCGAATACTCACTGGGTCTCAATG
AGCTCAAATCCAAGGAGCTGCGATTGTGGCAGGCCTTGATTGGAGAATTC
CTTGGCAATTTGATCCTCAATTTCTTTGCCTGCGGCGCATGCACCCAAAT
TGAGGATGGCACCTTCAAGGCCTTGGCTTTTGGCCTGGCTATCTTCATGG
CCATCACGATTGTGGGCCACTTGAGTGGTGGTCATGTGAATCCTGCCGTT
ACCGCTGGAATGTTGGTCGCAGGACGAATTAGCTTGATCAGAGCCTTTTT
CTATGTGGTTTTCCAGTGCTTGGGTGCAATTGCCGGAACTGCAGCGGTTA
AGATTCTCATCGATCAGGACTATTACAATGGCCTGGGTCACACCTCTCTG
GCGCCCAATATCACCGAGCTGCAGGGCCTGGGAATCGAGTTCTTCCTGGG
ACTCCTGCTGGTGCTCGTCGTCTTTGGGGCCTGTGATCCCCACAAGCCCG
ATTCCCGCTACACGGCGCCCTTGGCCATCGGAATGGCGGTGACCCTGGGT
CACTTGGGCACCATCCGCTACACCGGGGCCAGCATGAATCCCGCTCGCAC
CGTGGGCACCGCCTTTGCCACCGACATCTGGGCGTCGCATTGGGTATACT
GGGTGGGACCTGTGCTGGGGGGCGTGGCTGCCGCCCTGCTCTACACCCAG
GTCCTGGAGGCGAAGCCCGTGCCAAAGGTTAACGAGGCATCCGAGAAGTA
CCGAACGCACGCCGATGAACGCGAGGGATGCAAACCGAACCACAACCCGA
ACCATTTGGCATATACATATCTCGCTTAAAAGCTTTCTAGACCAT
BS26373.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:45:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7777-RC | 813 | CG7777-PC | 1..813 | 17..829 | 4065 | 100 | Plus |
| CG7777-RB | 807 | CG7777-PB | 1..760 | 17..776 | 3800 | 100 | Plus |
| CG7777-RD | 780 | CG7777-PD | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7777-RC | 1479 | CG7777-RC | 216..1028 | 17..829 | 4065 | 100 | Plus |
| CG7777-RB | 1386 | CG7777-RB | 216..975 | 17..776 | 3800 | 100 | Plus |
| CG7777-RD | 1388 | CG7777-RD | 216..974 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:45:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11441066..11441491 | 351..776 | 2130 | 100 | Plus |
| 2R | 25286936 | 2R | 11439968..11440125 | 51..208 | 790 | 100 | Plus |
| 2R | 25286936 | 2R | 11440186..11440330 | 208..352 | 725 | 100 | Plus |
| 2R | 25286936 | 2R | 11441648..11441703 | 774..829 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:45:54 has no hits.
BS26373.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:22 Download gff for
BS26373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RC | 213..1023 | 17..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:36:03 Download gff for
BS26373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RC | 216..1026 | 17..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:45 Download gff for
BS26373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RC | 216..1026 | 17..827 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:45 Download gff for
BS26373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11439833..11439868 | 17..52 | 100 | -> | Plus |
| 2R | 11439970..11440125 | 53..208 | 100 | -> | Plus |
| 2R | 11440187..11440330 | 209..352 | 100 | -> | Plus |
| 2R | 11441068..11441490 | 353..775 | 100 | -> | Plus |
| 2R | 11441650..11441701 | 776..827 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:36:03 Download gff for
BS26373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7327338..7327373 | 17..52 | 100 | -> | Plus |
| arm_2R | 7327475..7327630 | 53..208 | 100 | -> | Plus |
| arm_2R | 7327692..7327835 | 209..352 | 100 | -> | Plus |
| arm_2R | 7328573..7328995 | 353..775 | 100 | -> | Plus |
| arm_2R | 7329155..7329206 | 776..827 | 100 | | Plus |
BS26373.pep Sequence
Translation from 16 to 828
> BS26373.pep
MGKFEYSLGLNELKSKELRLWQALIGEFLGNLILNFFACGACTQIEDGTF
KALAFGLAIFMAITIVGHLSGGHVNPAVTAGMLVAGRISLIRAFFYVVFQ
CLGAIAGTAAVKILIDQDYYNGLGHTSLAPNITELQGLGIEFFLGLLLVL
VVFGACDPHKPDSRYTAPLAIGMAVTLGHLGTIRYTGASMNPARTVGTAF
ATDIWASHWVYWVGPVLGGVAAALLYTQVLEAKPVPKVNEASEKYRTHAD
EREGCKPNHNPNHLAYTYLA*
BS26373.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7777-PC | 270 | CG7777-PC | 1..270 | 1..270 | 1415 | 100 | Plus |
| CG7777-PD | 259 | CG7777-PD | 1..253 | 1..253 | 1312 | 100 | Plus |
| CG7777-PA | 264 | CG7777-PA | 1..253 | 1..253 | 1312 | 100 | Plus |
| CG7777-PB | 268 | CG7777-PB | 1..253 | 1..253 | 1312 | 100 | Plus |
| Drip-PE | 239 | CG9023-PE | 1..228 | 1..233 | 473 | 40.4 | Plus |
