Clone BS26379 Report

Search the DGRC for BS26379

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:263
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptCG32720-RB
Protein status:BS26379.pep: full length peptide match
Sequenced Size:1043

Clone Sequence Records

BS26379.complete Sequence

1043 bp assembled on 2011-08-24

GenBank Submission: KX800212

> BS26379.complete
GAAGTTATCAGTCGACATGGGTCGCAGTAAGGTGTTAAGAAAGAAGCAAT
CTAGCAAGAAGCGACGACATACAATTGATCAAGAAAATACAGACGATTAT
TATATGACACCCGAAGAAGTACGGCAATCGGTTGAGCGGTGGTCATTCCT
TTGGCACTGTAGTGATTCTGATTCTGATTCTAATTCCGAATCGGAGAGCA
GTTCAACGTCATCATTGTTGCAACATGATCCATCTCTGTATGGAGACTGG
CGTGTGCGGGGTGAAGAATTCAAATTAGAGACTACCGGCAAGGAAATGCT
GATGAATTTAAGCAAATTTCCCTTTCCGGAGATAATCAAACCACCCGTTT
TGCTGGATACTAAGTTGCCCAAAACCCTGCGGGTTAATCACTGGCCCTAT
ATTACACACAAAATTTTCGACTACGTAATGCCGGACATATATTTTCGGTC
CATGGAGTTCATGAAGAAACCCGTATGTGAGGGAGCCGTGGGTTATGATC
CTTTGTACTATGGCTCATCAATTTTGATCAAACCTCTGTGCAAGTACAGT
AAGCCACGCAATTTTTCACCCACATGGACCAATACTAGCTTGGTGTCCTG
GATAGATGGGCGTCGTTTTGCCAAGATGGTGAAACGTAATGACTCGCAGA
TGGGTAATGAGAAGCTACTTCGGTGGACTAAGGTTCGCCCGTTTTGGAGC
AATAAACTCCTGGCTGGACTTAGAAAGGACCCGGACGCTAAACTAATTGT
AAGGTGGAAGCGTCCCAGGACAAGATTTTCTTTTAATCCGGAATCCGATG
CGATGGACAAACAATGGGATATGCCCGAGGAGGACCCGTTGCCATCGGAT
GAGTTTTACGTAGAATATGTAATGAATGATGATCCCGAAACACAACGATC
ATGGAACTCCTCGTTGTCTGACGATTCTATGCCGGGAATAACTAAATCCC
AGTCTGATCTCAATCTCGAATATTTAAAGATAAGGCCGATATTAAGACGT
TGTCATAGTTCGAGCAGTCTTTTTTAGAAGCTTTCTAGACCAT

BS26379.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32720-RB 1011 CG32720-PB 1..1011 17..1027 5055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:47:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG32720-RB 1335 CG32720-RB 71..1081 17..1027 5055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:47:02
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7535879..7536889 1027..17 5055 100 Minus
Blast to na_te.dros performed 2014-11-26 21:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
transib2 2844 transib2 TRANSIB2 2844bp 2539..2571 165..197 120 84.8 Plus

BS26379.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:24 Download gff for BS26379.complete
Subject Subject Range Query Range Percent Splice Strand
CG32720-RB 1..1011 17..1027 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:36:34 Download gff for BS26379.complete
Subject Subject Range Query Range Percent Splice Strand
CG32720-RB 71..1081 17..1027 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:42:09 Download gff for BS26379.complete
Subject Subject Range Query Range Percent Splice Strand
CG32720-RB 71..1081 17..1027 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:42:09 Download gff for BS26379.complete
Subject Subject Range Query Range Percent Splice Strand
X 7535879..7536889 17..1027 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:36:34 Download gff for BS26379.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7429912..7430922 17..1027 100   Minus

BS26379.pep Sequence

Translation from 16 to 1026

> BS26379.pep
MGRSKVLRKKQSSKKRRHTIDQENTDDYYMTPEEVRQSVERWSFLWHCSD
SDSDSNSESESSSTSSLLQHDPSLYGDWRVRGEEFKLETTGKEMLMNLSK
FPFPEIIKPPVLLDTKLPKTLRVNHWPYITHKIFDYVMPDIYFRSMEFMK
KPVCEGAVGYDPLYYGSSILIKPLCKYSKPRNFSPTWTNTSLVSWIDGRR
FAKMVKRNDSQMGNEKLLRWTKVRPFWSNKLLAGLRKDPDAKLIVRWKRP
RTRFSFNPESDAMDKQWDMPEEDPLPSDEFYVEYVMNDDPETQRSWNSSL
SDDSMPGITKSQSDLNLEYLKIRPILRRCHSSSSLF*

BS26379.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG32720-PB 336 CG32720-PB 1..336 1..336 1815 100 Plus