Clone BS26383 Report

Search the DGRC for BS26383

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:263
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG43101-RA
Protein status:BS26383.pep: full length peptide match
Sequenced Size:362

Clone Sequence Records

BS26383.complete Sequence

362 bp assembled on 2011-08-24

GenBank Submission: KX805908

> BS26383.complete
GAAGTTATCAGTCGACATGATCAAGTTTTTTGCCGTGGTTGTCTTGCTGG
CCATAAGTCCGCTATCGTCTGATTCTACTCTAATTGACATTGTGTCTAGT
TGTATAAATTTTCAGTTTAAGGCATTACTATACCTTGCGGAATCAACTGA
TGATAAATTTCATTGTATTGAAACATGTGTATATGATATTATCAGAAATC
TTACAAAGATTGATCTACCTAAACGCCCGGATCCCGAAATATGTCAAGGC
TTAAATGACAAATGTAAGTACGCCGAAGGATTACGAAAGTGTCTTCCACC
AAATTTAGATGAAAGATTTTGGAAAGATGTTTTTACACGAATATAAAAGC
TTTCTAGACCAT

BS26383.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG43101-RA 330 CG43101-PA 1..330 17..346 1650 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:45:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG43101-RA 405 CG43101-RA 24..354 17..347 1655 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:45:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15013098..15013362 347..83 1325 100 Minus
2R 25286936 2R 15013434..15013499 82..17 330 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:45:27 has no hits.

BS26383.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:21 Download gff for BS26383.complete
Subject Subject Range Query Range Percent Splice Strand
CG43101-RA 1..328 17..344 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:48 Download gff for BS26383.complete
Subject Subject Range Query Range Percent Splice Strand
CG43101-RA 24..351 17..344 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:34 Download gff for BS26383.complete
Subject Subject Range Query Range Percent Splice Strand
CG43101-RA 24..351 17..344 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:34 Download gff for BS26383.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15013101..15013362 83..344 100 <- Minus
2R 15013434..15013499 17..82 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:48 Download gff for BS26383.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10900606..10900867 83..344 100 <- Minus
arm_2R 10900939..10901004 17..82 100   Minus

BS26383.pep Sequence

Translation from 16 to 345

> BS26383.pep
MIKFFAVVVLLAISPLSSDSTLIDIVSSCINFQFKALLYLAESTDDKFHC
IETCVYDIIRNLTKIDLPKRPDPEICQGLNDKCKYAEGLRKCLPPNLDER
FWKDVFTRI*

BS26383.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG43101-PA 109 CG43101-PA 1..109 1..109 577 100 Plus