BS26384.complete Sequence
281 bp assembled on 2011-08-24
GenBank Submission: KX803947
> BS26384.complete
GAAGTTATCAGTCGACATGCTTTTGGGCATGGCCATCGCTTTTCCCACTC
ATCAGTTCGTGCCACACATACCTTATGGCATGGATGACTTTTACCCGTTT
CTTGCCAGAAATTCCACCGATGTGCTGCCGTTGTCTACAAATCTAACTCA
AATTGAACGACTAGGATGGGCCGATAAATGTGTGCAGTTTAGAAATAAGT
GCACATTAGCAGAGCATTGTTGCAGTCTTAGATGCCTGAAACGTATTTAT
CGATGCATTACCTAAAAGCTTTCTAGACCAT
BS26384.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:45:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42870-RB | 285 | CG42870-PB | 37..285 | 17..265 | 1245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:45:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42870-RB | 368 | CG42870-RB | 45..293 | 17..265 | 1245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:45:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21737186..21737320 | 151..17 | 675 | 100 | Minus |
3R | 32079331 | 3R | 21737008..21737121 | 265..152 | 570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:45:31 has no hits.
BS26384.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:22 Download gff for
BS26384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42870-RA | 11..257 | 17..263 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:49 Download gff for
BS26384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42870-RB | 45..291 | 17..263 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:36 Download gff for
BS26384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42870-RB | 45..291 | 17..263 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:36 Download gff for
BS26384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21737186..21737320 | 17..151 | 100 | | Minus |
3R | 21737010..21737121 | 152..263 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:49 Download gff for
BS26384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17562732..17562843 | 152..263 | 100 | <- | Minus |
arm_3R | 17562908..17563042 | 17..151 | 100 | | Minus |
BS26384.pep Sequence
Translation from 16 to 264
> BS26384.pep
MLLGMAIAFPTHQFVPHIPYGMDDFYPFLARNSTDVLPLSTNLTQIERLG
WADKCVQFRNKCTLAEHCCSLRCLKRIYRCIT*
BS26384.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42870-PB | 94 | CG42870-PB | 13..94 | 1..82 | 454 | 100 | Plus |