Clone BS26387 Report

Search the DGRC for BS26387

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:263
Well:87
Vector:pDNR-Dual
Associated Gene/TranscriptCG34029-RA
Protein status:BS26387.pep: full length peptide match
Sequenced Size:377

Clone Sequence Records

BS26387.complete Sequence

377 bp assembled on 2011-08-24

GenBank Submission: KX802882

> BS26387.complete
GAAGTTATCAGTCGACATGGAATCCCCGGACAACAGGCTGTACATGTGCA
CCGCGTGCTTTAAAAGGTTTCTTTGGAGCGAACTGTCGAGGAAGGAGCTC
CGCTGCGCTCAGTGCCGTCTGTCAACCAAAATCTGTGTCATTTGCGATAA
GAAGTTTGAGCCGCGCGAAATGTCGCAAGTTTACTGCAAGCAATGCAATT
TCTACATCGAGAGACATGCCGTAGTCAAGCCCCCTCCCTTGGGTGTACAA
ATCGGAAAACCAGCGGAGATGACCAGTGGGCCAGGTACGGAAGGATCTTC
GATCACAGAGCGCTGGAAGGAGATTAAGGCCGCCGCTGGAATCGTGGATG
ACTTTGATTGAAAGCTTTCTAGACCAT

BS26387.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG34029-RA 345 CG34029-PA 1..345 17..361 1725 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:48:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG34029-RA 460 CG34029-RA 52..400 14..362 1745 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:48:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21970827..21971175 362..14 1745 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:48:30 has no hits.

BS26387.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:29 Download gff for BS26387.complete
Subject Subject Range Query Range Percent Splice Strand
CG34029-RA 17..360 17..360 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:37:18 Download gff for BS26387.complete
Subject Subject Range Query Range Percent Splice Strand
CG34029-RA 50..393 17..360 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:42:47 Download gff for BS26387.complete
Subject Subject Range Query Range Percent Splice Strand
CG34029-RA 55..398 17..360 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:42:47 Download gff for BS26387.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21970829..21971172 17..360 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:37:18 Download gff for BS26387.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17858334..17858677 17..360 100   Minus

BS26387.pep Sequence

Translation from 16 to 360

> BS26387.pep
MESPDNRLYMCTACFKRFLWSELSRKELRCAQCRLSTKICVICDKKFEPR
EMSQVYCKQCNFYIERHAVVKPPPLGVQIGKPAEMTSGPGTEGSSITERW
KEIKAAAGIVDDFD*

BS26387.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG34029-PA 114 CG34029-PA 1..114 1..114 621 100 Plus