Clone BS26388 Report

Search the DGRC for BS26388

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:263
Well:88
Vector:pDNR-Dual
Associated Gene/TranscriptCG43111-RA
Protein status:BS26388.pep: gold
Sequenced Size:458

Clone Sequence Records

BS26388.complete Sequence

458 bp assembled on 2011-08-24

GenBank Submission: KX801068

> BS26388.complete
GAAGTTATCAGTCGACATGAATCATCTGTTCGTGTTAACTTTTATTCTGC
TTTTTGCCTTTGCCTTGGGATCCGAAGGTGAATTGACCGAAATGTGCCAA
CCACAATTAAACAGAAGAGACCTATTCGACATAGCCGTGTTGGCCGCCAT
AAAGGTTCTCATCCGTCAGATTGAGAGCTACAACGAGGATCGGCCTATCT
CTTCAAGCCTGATGGTTCACATTACGACTATGGTCTCCAAGTACATCCTG
ACCGGTAAGAGCGTAAAGTTCATCCTTCGGCTGCTCTATGTGGCATGCCG
TATGAACAAACCGCTGACACAAGAAAATAAAAAACAAGCTCCAGTCCGCA
CAGCATTCTTATGCTTGTTGGAATTGGGCAAAGAAAAGTGCTATACATAC
AAGGAAAAGGCGGAAGGAGACTTCTCTGTGGAGTTGCAATGAAAGCTTTC
TAGACCAT

BS26388.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG43111-RA 426 CG43111-PA 1..426 17..442 2130 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:48:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG43111-RA 553 CG43111-RA 41..467 17..443 2135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19552162..19552586 19..443 2125 100 Plus
Blast to na_te.dros performed on 2014-11-26 21:48:46 has no hits.

BS26388.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:29 Download gff for BS26388.complete
Subject Subject Range Query Range Percent Splice Strand
CG43111-RA 41..465 17..441 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:37:26 Download gff for BS26388.complete
Subject Subject Range Query Range Percent Splice Strand
CG43111-RA 41..465 17..441 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:42:53 Download gff for BS26388.complete
Subject Subject Range Query Range Percent Splice Strand
CG43111-RA 41..465 17..441 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:42:53 Download gff for BS26388.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19552161..19552584 17..441 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:37:26 Download gff for BS26388.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15439666..15440089 17..441 99   Plus

BS26388.pep Sequence

Translation from 16 to 441

> BS26388.pep
MNHLFVLTFILLFAFALGSEGELTEMCQPQLNRRDLFDIAVLAAIKVLIR
QIESYNEDRPISSSLMVHITTMVSKYILTGKSVKFILRLLYVACRMNKPL
TQENKKQAPVRTAFLCLLELGKEKCYTYKEKAEGDFSVELQ*

BS26388.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG43111-PA 141 CG43111-PA 1..141 1..141 711 100 Plus