BS26389.complete Sequence
674 bp assembled on 2011-08-24
GenBank Submission: KX804513
> BS26389.complete
GAAGTTATCAGTCGACATGGACTGCGCACCACTGAACTTGGCTCATTTCC
ACGAGCGAAGGTCGGAGCGATTTATACGCAATCACCGCTATGAGGAGGCC
ATTAAAGCGCTGGAAACATCCCTAATCTACATGCAGGATGCCCAAAAACG
GGTGGCTCTGCCCAAATCCAAGGAAGTTCTGGACACATTGACCCTCGATT
TTCAGCGCAAACTGCGTCAAATTGAGATGCGAAAGACGCAGCATGGTCTG
AACAAGCTGAAGGATTATGCTCCCTTGAAGGAAACCAGTCCCATGCTGCC
CCTGCGACCAGAAGCCGGAGCAAGTGGAGGCGCAGGAGGATCCGCTCAGT
CGGTGGCCAAGGCAATCGACAAAACAGTGCAGGACTTCGATGCCAAGTTC
ACCTCCTCCTTGGTGGCAAAGGCCTCTAGCACACTGGCCCATTCGGAGCC
CCATATGGAGACGCTGAAGAAGAGCGATTCTGCCCAGGAGGAGCAGGAAC
ACGATACTTGCGATCAGCGGCTGGCGGGCAGTGGAGACCTGGACCTGCCA
TCCTTGGCGCCCTTGGAGTTGCCCTCCTTCGATTACAGCCTGTTCACCAG
CTCCTCGGCTCCTTCGTTGGCCAGCTATGCCGGCATGGCTGAGAGCTTCC
AGAAATAGAAGCTTTCTAGACCAT
BS26389.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:49:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42554-RA | 642 | CG42554-PA | 1..642 | 17..658 | 3210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:49:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42554-RA | 1023 | CG42554-RA | 163..806 | 15..658 | 3220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:49:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 835935..836553 | 40..658 | 3095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:49:01 has no hits.
BS26389.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:30 Download gff for
BS26389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42554-RA | 41..676 | 17..652 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:37:35 Download gff for
BS26389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42554-RA | 165..800 | 17..652 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:01 Download gff for
BS26389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42554-RA | 165..800 | 17..652 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:43:01 Download gff for
BS26389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 835847..835870 | 17..40 | 100 | -> | Plus |
3L | 835936..836547 | 41..652 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:37:35 Download gff for
BS26389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 835847..835870 | 17..40 | 100 | -> | Plus |
arm_3L | 835936..836547 | 41..652 | 100 | | Plus |
BS26389.pep Sequence
Translation from 16 to 657
> BS26389.pep
MDCAPLNLAHFHERRSERFIRNHRYEEAIKALETSLIYMQDAQKRVALPK
SKEVLDTLTLDFQRKLRQIEMRKTQHGLNKLKDYAPLKETSPMLPLRPEA
GASGGAGGSAQSVAKAIDKTVQDFDAKFTSSLVAKASSTLAHSEPHMETL
KKSDSAQEEQEHDTCDQRLAGSGDLDLPSLAPLELPSFDYSLFTSSSAPS
LASYAGMAESFQK*
BS26389.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42554-PA | 213 | CG42554-PA | 1..213 | 1..213 | 1077 | 100 | Plus |