BS26394.complete Sequence
404 bp assembled on 2011-08-24
GenBank Submission: KX805079
> BS26394.complete
GAAGTTATCAGTCGACATGAAGCTACTGCTGTTGGCGGTGATTGTTGCCC
TCGCTTGGCTTCTTATAGAGGCTGGCAAGACCAGGACTAAGAACAGCTCC
TGTCTGGTGAAAAACAAATATCCCCCCGAATCTTCTTGTAGATCATCGCA
TCGGGAATTCTTTGCCTTTCACCGAGTTCTATTCGACTGCATAAAGGTGA
CCACAAATTGCCGCAAGATCTACAGGAGGAATGAGTTCCATAGTTTGCAA
TCGTGCAGAGATGCATGTCACTACCACATGGCTGAACCAAGTCCGCCACC
ACCCCAAAATGGTACGACTTCTGCACCTGGAGGTGCCTCCGGAGCGCCAG
GAGACGCTCCAGCAGCTGAAACGCCAGCTGCAGCGTGAAAGCTTTCTAGA
CCAT
BS26394.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:47:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43057-RB | 372 | CG43057-PB | 1..372 | 17..388 | 1860 | 100 | Plus |
| CG43057-RA | 372 | CG43057-PA | 1..372 | 17..388 | 1860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:47:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43057-RB | 577 | CG43057-RB | 15..387 | 16..388 | 1865 | 100 | Plus |
| CG43057-RA | 468 | CG43057-RA | 15..387 | 16..388 | 1865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8243513..8243707 | 388..194 | 975 | 100 | Minus |
| 2L | 23513712 | 2L | 8243757..8243868 | 198..87 | 560 | 100 | Minus |
| 2L | 23513712 | 2L | 8243913..8243989 | 92..16 | 370 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:47:20 has no hits.
BS26394.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:25 Download gff for
BS26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43057-RA | 1..371 | 17..387 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:36:42 Download gff for
BS26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43057-RA | 16..386 | 17..387 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:42:16 Download gff for
BS26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43057-RA | 16..386 | 17..387 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:42:16 Download gff for
BS26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8243514..8243704 | 197..387 | 100 | <- | Minus |
| 2L | 8243759..8243868 | 87..196 | 100 | <- | Minus |
| 2L | 8243919..8243988 | 17..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:36:42 Download gff for
BS26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8243514..8243704 | 197..387 | 100 | <- | Minus |
| arm_2L | 8243759..8243868 | 87..196 | 100 | <- | Minus |
| arm_2L | 8243919..8243988 | 17..86 | 100 | | Minus |
BS26394.pep Sequence
Translation from 16 to 387
> BS26394.pep
MKLLLLAVIVALAWLLIEAGKTRTKNSSCLVKNKYPPESSCRSSHREFFA
FHRVLFDCIKVTTNCRKIYRRNEFHSLQSCRDACHYHMAEPSPPPPQNGT
TSAPGGASGAPGDAPAAETPAAA*
BS26394.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:26:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43057-PB | 123 | CG43057-PB | 1..123 | 1..123 | 661 | 100 | Plus |
| CG43057-PA | 123 | CG43057-PA | 1..123 | 1..123 | 661 | 100 | Plus |
