BS26419.complete Sequence
551 bp assembled on 2011-08-24
GenBank Submission: KX802776
> BS26419.complete
GAAGTTATCAGTCGACATGCCACACGTGAGATTTGGCTACAATGGAAAGC
CAGGAGCACCAAGAACGGGTATGATAACCGCACTTGAGGTAAAGAAATGC
CTCAATATAACAATCCTAAAAAATTTGAATAAAAAAAAGTTATTGGGTGT
TTGGTTTGCATACGCAACAACACCTGTCAATATACCCGCCTACAAACGTC
GTTGTTCATCGTATAATGTTCAGGATAGTACCTTTTTCGATACCCATATC
GTGTATACGGACTACAAGCACGTGACTGTCACCTATGACTGCAAGTACAA
CGATATGACCATGCTGCATGACCTTAAAGTCCGCGTTTTAACACGCACTC
GAACCCCTGTGCTCAAAGATTTAAACCAGGCCTTATACTTTCTAGAGGAA
CATGCATTTTCAATCAAAAACTTGGATTTCCTCAAGTCAAAAGCATTCTG
CTTTGAGTGGTACGTGTTGAAATACCACTCCAAAACACGACCGGGTCGAT
TCAATGCGCCCATCATCCGGGTTTGGGATCATTGAAAGCTTTCTAGACCA
T
BS26419.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:50:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43050-RA | 519 | CG43050-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:50:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43050-RA | 1119 | CG43050-RA | 203..721 | 17..535 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:49:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13120158..13120369 | 324..535 | 1060 | 100 | Plus |
2L | 23513712 | 2L | 13119996..13120092 | 231..327 | 470 | 99 | Plus |
2L | 23513712 | 2L | 13119843..13119935 | 138..230 | 465 | 100 | Plus |
2L | 23513712 | 2L | 13119696..13119783 | 52..139 | 440 | 100 | Plus |
2L | 23513712 | 2L | 13119496..13119533 | 17..54 | 190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:50:00 has no hits.
BS26419.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:33 Download gff for
BS26419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43050-RA | 203..720 | 17..534 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:11 Download gff for
BS26419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43050-RA | 203..720 | 17..534 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:30 Download gff for
BS26419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43050-RA | 203..720 | 17..534 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:43:30 Download gff for
BS26419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13119496..13119532 | 17..53 | 100 | -> | Plus |
2L | 13119698..13119783 | 54..139 | 100 | -> | Plus |
2L | 13119845..13119935 | 140..230 | 100 | -> | Plus |
2L | 13119996..13120088 | 231..323 | 100 | -> | Plus |
2L | 13120158..13120368 | 324..534 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:11 Download gff for
BS26419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13119496..13119532 | 17..53 | 100 | -> | Plus |
arm_2L | 13119698..13119783 | 54..139 | 100 | -> | Plus |
arm_2L | 13119845..13119935 | 140..230 | 100 | -> | Plus |
arm_2L | 13119996..13120088 | 231..323 | 100 | -> | Plus |
arm_2L | 13120158..13120368 | 324..534 | 100 | | Plus |
BS26419.pep Sequence
Translation from 16 to 534
> BS26419.pep
MPHVRFGYNGKPGAPRTGMITALEVKKCLNITILKNLNKKKLLGVWFAYA
TTPVNIPAYKRRCSSYNVQDSTFFDTHIVYTDYKHVTVTYDCKYNDMTML
HDLKVRVLTRTRTPVLKDLNQALYFLEEHAFSIKNLDFLKSKAFCFEWYV
LKYHSKTRPGRFNAPIIRVWDH*
BS26419.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:27:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43050-PA | 172 | CG43050-PA | 1..172 | 1..172 | 936 | 100 | Plus |