Clone BS26431 Report

Search the DGRC for BS26431

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:264
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG42463-RB
Protein status:BS26431.pep: gold
Sequenced Size:386

Clone Sequence Records

BS26431.complete Sequence

386 bp assembled on 2011-08-24

GenBank Submission: KX801174

> BS26431.complete
GAAGTTATCAGTCGACATGAAATTACTCTCTGCGGTTCTTCTAATAGGTA
CCTTAAGTGCCATTTGTCTTGGCCAAAAGGAACCCATATGCAGGTCTGAT
CCGAGTGTTGTCGGAAATTGTGGGCATAAAATTAAAGGGTATACCTATGA
AGTTCGAAAAAATAATTGCAAGAAGTTCCGGGCGATGGCCTGTAAGGTAA
CTGGAAACTTTTTCCGTAGCAGGGATGCGTGCAATGCGAAGTGCAAGGAC
ACCAGGAAGCCAGCTCAAAGCGGAGTCATTGAATTCTTCAGTCGAACGGT
GTCGCAGTTTCTGCAGATGATCTTAAGCCTAATGAGTTGGGCCGGATTTT
GAAAGCTTTCTAGACCATTCGTGGGGCGCGAAAGGG

BS26431.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:50:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG42463-RB 336 CG42463-PB 1..336 17..352 1680 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:50:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG42463-RB 384 CG42463-RB 15..351 17..353 1685 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:50:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3668724..3668993 353..84 1350 100 Minus
2L 23513712 2L 3669054..3669120 83..17 335 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:50:34 has no hits.

BS26431.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:34 Download gff for BS26431.complete
Subject Subject Range Query Range Percent Splice Strand
CG42463-RB 15..351 17..353 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:29 Download gff for BS26431.complete
Subject Subject Range Query Range Percent Splice Strand
CG42463-RB 15..351 17..353 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:49 Download gff for BS26431.complete
Subject Subject Range Query Range Percent Splice Strand
CG42463-RB 15..351 17..353 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:43:49 Download gff for BS26431.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3668729..3668993 84..348 100 <- Minus
2L 3669054..3669120 17..83 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:29 Download gff for BS26431.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3668729..3668993 84..348 100 <- Minus
arm_2L 3669054..3669120 17..83 100   Minus

BS26431.pep Sequence

Translation from 16 to 351

> BS26431.pep
MKLLSAVLLIGTLSAICLGQKEPICRSDPSVVGNCGHKIKGYTYEVRKNN
CKKFRAMACKVTGNFFRSRDACNAKCKDTRKPAQSGVIEFFSRTVSQFLQ
MILSLMSWAGF*

BS26431.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:27:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG42463-PB 111 CG42463-PB 1..111 1..111 585 100 Plus
Sfp24Bc-PA 100 CG42602-PA 5..78 7..78 180 43.2 Plus
Sfp24Ba-PA 121 CG42461-PA 6..75 8..77 174 45.7 Plus
Sfp24Bb-PA 110 CG42462-PA 7..97 13..97 148 35.2 Plus
CG16712-PB 82 CG16712-PB 1..82 1..78 133 35.4 Plus