BS26455.complete Sequence
722 bp assembled on 2011-08-24
GenBank Submission: KX803917
> BS26455.complete
GAAGTTATCAGTCGACATGGGTGATTCCAGCGACTCAGACTCTTCTACTG
AATGGGAGCAGAACACTAGGGTTATTTCCTTACCCTTTTCCAGAAACCGT
TCACATTTGAGCTCTCGCCTCAGTTACCTGGTGGGACTTCAAATGGAAAA
CTTCAGGACCTCGAATAATTCTGGAGTATCACAGCGAATCCATAACACCG
GGCCCACTCCCGTACTCGCGCCCTCCGGATTAAGATCCCGCTTACTCAGC
GGTTCCTCTGAGCGGAATCCAAATGAGTATTACGGAGACTCGGACTCCTC
AAGCAGCAGCAGATCTATCGACAGAACCCCATTCCTGTTGGAGTATTCCA
GCGACTCAGAGTCGTCTAGTTCCAGTGATAGTGAAAGCTCATCGACCAGC
ATTAGCTTCGATAGCAGTATGAGCTCCACCGAATCATCAACACCAATGGG
ACATACAGAATCCTCAGATTCAAACGAGGATTCTCCTCCCAACAAACGGA
TCAAATCAGATGACGAGGAGTCCAAGAAATCTGTCTTGCCCTACAACTGC
CCTGTGTGCCTGGAAGATGTCCGCGAGAAGCTACCAGTGTCCACCAATTG
TGGCCACGTTTTCTGCAAAGCGTGCATTAAGAGAGCTGTCGACACTGGCA
GGGTATGCCCATTGTGCGGAGTGGATGAGCCCGAATTCCATCGTATTTTC
TTGTAAAAGCTTTCTAGACCAT
BS26455.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:51:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elfless-RC | 690 | CG15150-PC | 1..690 | 17..706 | 3450 | 100 | Plus |
| elfless-RB | 690 | CG15150-PB | 1..690 | 17..706 | 3450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:51:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elfless-RC | 1376 | CG15150-RC | 100..789 | 17..706 | 3450 | 100 | Plus |
| elfless-RB | 1643 | CG15150-RB | 100..789 | 17..706 | 3450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:51:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18010497..18010866 | 706..337 | 1850 | 100 | Minus |
| 2L | 23513712 | 2L | 18011077..18011207 | 260..130 | 655 | 100 | Minus |
| 2L | 23513712 | 2L | 18011261..18011376 | 132..17 | 580 | 100 | Minus |
| 2L | 23513712 | 2L | 18010934..18011011 | 337..260 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:51:12 has no hits.
BS26455.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:36 Download gff for
BS26455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RC | 100..787 | 17..704 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:51 Download gff for
BS26455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RB | 100..787 | 17..704 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:08 Download gff for
BS26455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RB | 100..787 | 17..704 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:08 Download gff for
BS26455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18010499..18010865 | 338..704 | 100 | <- | Minus |
| 2L | 18010934..18011011 | 260..337 | 100 | <- | Minus |
| 2L | 18011078..18011206 | 131..259 | 100 | <- | Minus |
| 2L | 18011263..18011376 | 17..130 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:51 Download gff for
BS26455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18010499..18010865 | 338..704 | 100 | <- | Minus |
| arm_2L | 18010934..18011011 | 260..337 | 100 | <- | Minus |
| arm_2L | 18011078..18011206 | 131..259 | 100 | <- | Minus |
| arm_2L | 18011263..18011376 | 17..130 | 100 | | Minus |
BS26455.pep Sequence
Translation from 16 to 705
> BS26455.pep
MGDSSDSDSSTEWEQNTRVISLPFSRNRSHLSSRLSYLVGLQMENFRTSN
NSGVSQRIHNTGPTPVLAPSGLRSRLLSGSSERNPNEYYGDSDSSSSSRS
IDRTPFLLEYSSDSESSSSSDSESSSTSISFDSSMSSTESSTPMGHTESS
DSNEDSPPNKRIKSDDEESKKSVLPYNCPVCLEDVREKLPVSTNCGHVFC
KACIKRAVDTGRVCPLCGVDEPEFHRIFL*
BS26455.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:27:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elfless-PC | 229 | CG15150-PC | 1..229 | 1..229 | 1186 | 100 | Plus |
| elfless-PB | 229 | CG15150-PB | 1..229 | 1..229 | 1186 | 100 | Plus |
| dgrn-PD | 205 | CG10981-PD | 42..205 | 42..229 | 183 | 30.7 | Plus |
| dgrn-PB | 312 | CG10981-PB | 149..312 | 42..229 | 183 | 30.7 | Plus |
| dgrn-PA | 319 | CG10981-PA | 156..319 | 42..229 | 183 | 30.7 | Plus |
