Clone BS26474 Report

Search the DGRC for BS26474

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:264
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG43063-RA
Protein status:BS26474.pep: gold
Sequenced Size:463

Clone Sequence Records

BS26474.complete Sequence

463 bp assembled on 2011-08-24

GenBank Submission: KX801408

> BS26474.complete
GAAGTTATCAGTCGACATGGAAATGCACTTCTCAGTATTTGTTGCGGTCA
CATTTCTTTTGCTGTCGGACATCACTCATCCGCTGGAGACCCTCGATGAC
TTTGAAGTCGCCGAGGAAATAACTACACCGCGCGAAAATGGGGATATTGT
TGGTCCTCTTAATCCGAAACGCATCGAGGGACGAACTCGACAAATGAGCG
TACTATCTTTTGTGGGAAAAAACCGAACGGGCAAAATGAATGAAAACTAT
TGCTGCTTCTGGATATATCAGGCCCATCCTCCCATTCCTCACAGCTGGAA
ACATATGGCCGAGTATCCATTCGATTTTCAGTTCAACGGAGAGTTTGTGC
GGAACCAACGACACAATGAAGTTGAAGTGCCTGCAGTTCAGGATGGCGAC
AGTGACAACTCAACAAGTGTAATTTGAAAGCTTTCTAGACCATTCGTTTG
GCGCGAGAAACGG

BS26474.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG43063-RA 405 CG43063-PA 1..405 23..427 2025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG43063-RA 488 CG43063-RA 29..439 17..427 2055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13086326..13086712 41..427 1935 100 Plus
Blast to na_te.dros performed on 2014-11-26 21:51:31 has no hits.

BS26474.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:40:36 Download gff for BS26474.complete
Subject Subject Range Query Range Percent Splice Strand
CG43063-RA 29..443 17..433 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:39:00 Download gff for BS26474.complete
Subject Subject Range Query Range Percent Splice Strand
CG43063-RA 29..443 17..433 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:16 Download gff for BS26474.complete
Subject Subject Range Query Range Percent Splice Strand
CG43063-RA 29..443 17..433 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:16 Download gff for BS26474.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13086252..13086276 17..41 100 -> Plus
3R 13086327..13086716 42..433 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:39:00 Download gff for BS26474.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8911974..8911998 17..41 100 -> Plus
arm_3R 8912049..8912438 42..433 99   Plus

BS26474.pep Sequence

Translation from 16 to 426

> BS26474.pep
MEMHFSVFVAVTFLLLSDITHPLETLDDFEVAEEITTPRENGDIVGPLNP
KRIEGRTRQMSVLSFVGKNRTGKMNENYCCFWIYQAHPPIPHSWKHMAEY
PFDFQFNGEFVRNQRHNEVEVPAVQDGDSDNSTSVI*

BS26474.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG43063-PA 134 CG43063-PA 1..134 3..136 727 100 Plus