BS26501.complete Sequence
619 bp assembled on 2011-08-26
GenBank Submission: KX801649
> BS26501.complete
GAAGTTATCAGTCGACATGCTGCGAATCGTTGTAACTTTGGCTCTAATTC
TGGCCACAGTCAATGCCACCAATGTCCAGCAGTGCAAAAATAAGCCGTTT
CCACTGGATGTGAATATTAAGGATTGCGAGGAACCGCCGTGCGTTGTGTA
CAAAGGAACCATAGCAGTCATGGAGGTGCACTTCCTGGGCAATAACAACA
ATATCAAGAGCATTACGGCCACCACAACGGCAAAGGTTTTGGGCATGAAT
CTGCCATATGCCCTACCCGACGAAGTGTCCGATGTGTGCCGCAATCTCCT
GTACGGTGCCATCTGTCCCATCGACAAGGACGAGGATGTCACGTATCAGT
TCAACTTCTATGTGGAGCCTTCGTTCCCGGAAATAACGGCGGATGTCACT
GTCACGTTGAACGATGCGCAGAACGAACCGATCACCTGCTTCGTCGTGAG
CTGTAAAATCCGGAAGGGAGCCACTGCAGCACAGATGGACGGATATCTGT
TGGACTGGACGAACCCCCTTTAAAAGCTTTCTAGACCATTCGTTTGGCGC
GCAAAAGGGGGAGGTAAGTGGTCTATAATCTATAATCAATAATTCAATAA
TTCCATTAAATTCCCACCC
BS26501.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:16:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Npc2e-RB | 507 | CG31410-PB | 1..507 | 17..523 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:16:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Npc2e-RB | 661 | CG31410-RB | 67..573 | 17..523 | 2535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:16:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10053929..10054260 | 192..523 | 1660 | 100 | Plus |
| 3R | 32079331 | 3R | 10053763..10053874 | 84..195 | 545 | 99.1 | Plus |
| 3R | 32079331 | 3R | 10053398..10053465 | 17..84 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:16:51 has no hits.
BS26501.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:21 Download gff for
BS26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Npc2e-RB | 1..507 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:52:53 Download gff for
BS26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Npc2e-RB | 67..575 | 17..527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:56:23 Download gff for
BS26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Npc2e-RB | 67..575 | 17..527 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:56:23 Download gff for
BS26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10053398..10053464 | 17..83 | 100 | -> | Plus |
| 3R | 10053763..10053870 | 84..191 | 100 | -> | Plus |
| 3R | 10053929..10054260 | 192..523 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:52:53 Download gff for
BS26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5879120..5879186 | 17..83 | 100 | -> | Plus |
| arm_3R | 5879485..5879592 | 84..191 | 100 | -> | Plus |
| arm_3R | 5879651..5879982 | 192..523 | 100 | == | Plus |
BS26501.pep Sequence
Translation from 16 to 522
> BS26501.pep
MLRIVVTLALILATVNATNVQQCKNKPFPLDVNIKDCEEPPCVVYKGTIA
VMEVHFLGNNNNIKSITATTTAKVLGMNLPYALPDEVSDVCRNLLYGAIC
PIDKDEDVTYQFNFYVEPSFPEITADVTVTLNDAQNEPITCFVVSCKIRK
GATAAQMDGYLLDWTNPL*
BS26501.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Npc2e-PB | 168 | CG31410-PB | 1..168 | 1..168 | 887 | 100 | Plus |
| Npc2d-PA | 173 | CG12813-PA | 7..173 | 4..166 | 272 | 38 | Plus |
| Npc2c-PA | 165 | CG3934-PA | 7..164 | 2..154 | 265 | 35.4 | Plus |
