BS26502.complete Sequence
707 bp assembled on 2011-08-26
GenBank Submission: KX803596
> BS26502.complete
GAAGTTATCAGTCGACATGACTCCCACGACAATAGATGGCGTCACGATAC
GCATCATGCGCCCAGAGGATTATGCACAGGTAAAAGCCTATATGGAGGCT
GAGTACTACACATCGGAGCCTCTGTGCCAGTCCAGCGGCGAACCCGTTCA
CCAGCAGAACGAGGAGATCAACGACGCCTTCAACCAGTCGATAATCGCCG
AGGGCACCAGCCTTTTGGCACTGGATGAAAACGATGGTGGCCGGATTGTG
GGTCTAGTTCTGGCATGTGCCAGTTATCCCGATAATGTGAATGCAGGAAC
ATTGAATTTGAAGCTCGAGAATGTGGAGGATAACGCTTGGGGTCGAATGT
ATCATTTACTAATGAAGGCCAAGCGCGAAGTCAATCTGTTTGAGCGCTAC
GACATCCCGAAGGCGCTCTACTCCCACGTGACCAGCGTGGCCTCGTGGAA
GAGGGGCAAGGGCCTGGGCTCCCGCCTGGCCGCCACCCTGATGGAGCTGG
GCCGATCGAATGGTTTCCCCCTTATGATGGCCTTCTGCACTAGCTTCTAC
TCCGCTCGCCAGAAGGGGGCCTTGGGCATGGAGTGCATCTATTCCATCGA
CTACGCCGACTATAAGGACGATGAAGGACGAGTGATCTTCACACCGGCAG
CCCCACACACAAAGCTGCGAGTGATGGCAATCAAACTGTGAAAGCTTTCT
AGACCAT
BS26502.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:17:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18607-RA | 675 | CG18607-PA | 1..675 | 17..691 | 3375 | 100 | Plus |
| CG10659-RA | 669 | CG10659-PA | 360..669 | 382..691 | 515 | 77.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:17:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18607-RA | 744 | CG18607-RA | 18..692 | 17..691 | 3375 | 100 | Plus |
| CG10659-RA | 837 | CG10659-RA | 390..699 | 382..691 | 515 | 77.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:17:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19289126..19289800 | 17..691 | 3375 | 100 | Plus |
| 2L | 23513712 | 2L | 20025113..20025422 | 691..382 | 515 | 77.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:17:02 has no hits.
BS26502.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:21 Download gff for
BS26502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18607-RA | 1..674 | 17..690 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:52:59 Download gff for
BS26502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18607-RA | 18..691 | 17..690 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:56:28 Download gff for
BS26502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18607-RA | 18..691 | 17..690 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:56:28 Download gff for
BS26502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19289126..19289799 | 17..690 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:52:59 Download gff for
BS26502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15176631..15177304 | 17..690 | 100 | | Plus |
BS26502.pep Sequence
Translation from 16 to 690
> BS26502.pep
MTPTTIDGVTIRIMRPEDYAQVKAYMEAEYYTSEPLCQSSGEPVHQQNEE
INDAFNQSIIAEGTSLLALDENDGGRIVGLVLACASYPDNVNAGTLNLKL
ENVEDNAWGRMYHLLMKAKREVNLFERYDIPKALYSHVTSVASWKRGKGL
GSRLAATLMELGRSNGFPLMMAFCTSFYSARQKGALGMECIYSIDYADYK
DDEGRVIFTPAAPHTKLRVMAIKL*
BS26502.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18607-PA | 224 | CG18607-PA | 1..224 | 1..224 | 1166 | 100 | Plus |
| CG10659-PA | 222 | CG10659-PA | 1..222 | 1..224 | 673 | 57.6 | Plus |
| CG10476-PA | 222 | CG10476-PA | 7..222 | 7..224 | 415 | 39.9 | Plus |
| CG18606-PB | 222 | CG18606-PB | 7..222 | 7..224 | 408 | 39.4 | Plus |
| AANATL2-PB | 216 | CG9486-PB | 1..216 | 6..224 | 312 | 33.2 | Plus |
